myRT

myRT report for GCA_900232825.1_PRJEB20296

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Seq: OCTP01000010.1 (720870 bp)
Overview 1 RT 1: 98338-102765 bp 2 RT 2: 334081-338942 bp 3 RT 3: 676222-683369 bp 4 RT 4: 706119-711340 bp Neighborhood of RT #1 [98338, 102765] SSB_OBF Maff2 RVT-GII HNHc Neighborhood of RT #2 [334081, 339007] FolD FemAB FemAB RVT-GII GIIM PRX_Atyp2cys PRK05618 Neighborhood of RT #3 [676222, 683404] MPP_1 PRK13663 RVT-GII GIIM ApbE UPF0158 Neighborhood of RT #4 [706119, 711747] DegQ RVT-UNC RVT-GII GIIM DUF2871 AcrR Feature: gene Location: 98338-98661 bp Feature: domain Description: SSB_OBF Location: 98365-98596 bp Feature: domain Description: SSB_OBF Location: 98365-98596 bp Feature: gene Location: 98662-98793 bp Feature: domain Description: Maff2 Location: 98665-98791 bp Feature: domain Description: Maff2 Location: 98665-98791 bp Feature: gene Location: 99502-101370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99829-100567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99829-1 00567 bp Feature: domain Description: HNHc Note: nucleases Location: 101101-101260 bp Feature: domain Description: HNHc Note: nucleases Location: 1 01 1 01 -1 01 260 bp Feature: gene Location: 101627-102490 bp Feature: gene Location: 102505-102765 bp Feature: gene Location: 334081-334872 bp Feature: domain Description: FolD Location: 334102-334861 bp Feature: domain Description: FolD Location: 3341 02-334861 bp Feature: gene Location: 334875-335861 bp Feature: domain Description: FemAB Location: 334914-335529 bp Feature: domain Description: FemAB Location: 33491 4-335529 bp Feature: domain Description: FemAB Location: 335550-335847 bp Feature: domain Description: FemAB Location: 335550-335847 bp Feature: gene Location: 336382-337662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 336589-337204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 336589-337204 bp Feature: domain Description: GIIM Note: maturase Location: 337267-337498 bp Feature: domain Description: GIIM Note: maturase Location: 337267-337498 bp Feature: gene Location: 337733-338239 bp Feature: domain Description: PRX_Atyp2cys Location: 337796-338225 bp Feature: domain Description: PRX_Atyp2cys Location: 337796-338225 bp Feature: gene Location: 338360-339007 bp Feature: domain Description: PRK05618 Location: 338366-338942 bp Feature: domain Description: PRK0561 8 Location: 338366-338942 bp Feature: gene Location: 676222-678357 bp Feature: domain Description: MPP_1 Location: 676264-677203 bp Feature: domain Description: MPP_1 Location: 676264-677203 bp Feature: gene Location: 678410-679885 bp Feature: domain Description: PRK13663 Location: 678419-679883 bp Feature: domain Description: PRK1 3663 Location: 67841 9-679883 bp Feature: gene Location: 680003-681283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 680210-680825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68021 0-680825 bp Feature: domain Description: GIIM Note: maturase Location: 680888-681119 bp Feature: domain Description: GIIM Note: maturase Location: 680888-681 1 1 9 bp Feature: gene Location: 681786-682949 bp Feature: domain Description: ApbE Location: 682005-682944 bp Feature: domain Description: ApbE Location: 682005-682944 bp Feature: gene Location: 682946-683404 bp Feature: domain Description: UPF0158 Location: 682967-683369 bp Feature: domain Description: UPF01 58 Location: 682967-683369 bp Feature: gene Location: 706119-707372 bp Feature: domain Description: DegQ Location: 706173-707265 bp Feature: domain Description: DegQ Location: 7061 73-707265 bp Feature: gene Location: 707530-708237 bp Feature: domain Description: RVT-UNC Note: UNC RT Location: 707533-708211 bp Feature: domain Description: RVT-UNC Note: UNC RT Location: 707533-70821 1 bp Feature: gene Location: 708311-709591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 708518-709133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70851 8-7091 33 bp Feature: domain Description: GIIM Note: maturase Location: 709196-709427 bp Feature: domain Description: GIIM Note: maturase Location: 7091 96-709427 bp Feature: gene Location: 710106-711179 bp Feature: domain Description: DUF2871 Location: 710763-711141 bp Feature: domain Description: DUF2871 Location: 71 0763-71 1 1 41 bp Feature: gene Location: 711166-711747 bp Feature: domain Description: AcrR Location: 711199-711340 bp Feature: domain Description: AcrR Location: 71 1 1 99-71 1 340 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: OCTP01000008.1 (104701 bp)
Overview 1 RT 1: 33966-37505 bp 2 RT 2: 55636-60199 bp Neighborhood of RT #1 [33966, 37505] TraA_Ti DUF3847 RVT-GII GIIM XRE Neighborhood of RT #2 [55636, 60199] RVT-GII HNHc Maff2 Feature: gene Location: 33966-34250 bp Feature: domain Description: TraA_Ti Location: 33981-34245 bp Feature: domain Description: TraA_Ti Location: 33981-342 45 bp Feature: gene Location: 34707-34997 bp Feature: domain Description: DUF3847 Location: 34746-34974 bp Feature: domain Description: DUF3847 Location: 34746-34974 bp Feature: gene Location: 35170-36450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35377-35992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35377-35992 bp Feature: domain Description: GIIM Note: maturase Location: 36055-36286 bp Feature: domain Description: GIIM Note: maturase Location: 36055-362 86 bp Feature: gene Location: 36982-37173 bp Feature: domain Description: XRE Location: 36985-37171 bp Feature: domain Description: XRE Location: 36985-37171 bp Feature: gene Location: 37179-37505 bp Feature: gene Location: 55636-56133 bp Feature: gene Location: 56546-56689 bp Feature: gene Location: 57248-59107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57566-58304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57566-58304 bp Feature: domain Description: HNHc Note: nucleases Location: 58838-58997 bp Feature: domain Description: HNHc Note: nucleases Location: 58838-58997 bp Feature: gene Location: 59825-59977 bp Feature: domain Description: Maff2 Location: 59867-59975 bp Feature: domain Description: Maff2 Location: 59867-59975 bp Feature: gene Location: 60044-60199 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: OCTP01000011.1 (1092757 bp)
Overview 1 RT 1: 597835-602217 bp Neighborhood of RT #1 [597835, 602285] RVT-GII HNHc Maff2 SSB_OBF Feature: gene Location: 597835-598125 bp Feature: gene Location: 598135-598998 bp Feature: gene Location: 599264-601123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 599582-600320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 599582-6003 20 bp Feature: domain Description: HNHc Note: nucleases Location: 600854-601013 bp Feature: domain Description: HNHc Note: nucleases Location: 600854-601013 bp Feature: gene Location: 601841-601972 bp Feature: domain Description: Maff2 Location: 601844-601970 bp Feature: domain Description: Maff2 Location: 601844-601970 bp Feature: gene Location: 601974-602285 bp Feature: domain Description: SSB_OBF Location: 601998-602217 bp Feature: domain Description: SSB_OBF Location: 601998-602217 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT