myRT

myRT report for GCA_900239345.1_TdChD05_V1

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Seq: OESZ01000012.1 (314112 bp)
Overview 1 RT 1: 245919-251965 bp Neighborhood of RT #1 [245919, 254769] RhaT fabG RVT-Retrons SWIM WGR_DNA_ligase Feature: gene Location: 245919-246833 bp Ori: SOU86699.1 Feature: domain Description: RhaT Location: 245928-246822 bp Feature: domain Description: RhaT Location: 245928-246822 bp Feature: gene Location: 247321-248037 bp Ori: SOU86700.1 Gene: yoxD Feature: domain Description: fabG Location: 247324-248035 bp Feature: domain Description: fabG Location: 247324-248035 bp Feature: gene Location: 248296-249837 bp Ori: SOU86701.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 248845-249463 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 248845-249463 bp Feature: gene Location: 250085-251716 bp Ori: SOU86702.1 Feature: domain Description: SWIM Location: 251591-251687 bp Feature: domain Description: SWIM Location: 251 591 -251 687 bp Feature: gene Location: 251731-254769 bp Ori: SOU86703.1 Feature: domain Description: WGR_DNA_ligase Location: 251749-251965 bp Feature: domain Description: WGR_DNA_ligase Location: 251 749-251 965 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RhaT (TIGR00776), fabG (PRK12825), RVT-Retrons, SWIM (pfam04434), WGR_DNA_ligase (cd07998)

Seq: OESZ01000046.1 (126448 bp)
Overview 1 RT 1: 34217-39679 bp Neighborhood of RT #1 [34217, 39729] glyA NhaP RVT-UG2 LPLAT_ABO13168-like Feature: gene Location: 34217-35491 bp Ori: SOU87891.1 Gene: glyA Feature: domain Description: glyA Location: 34223-35471 bp Feature: domain Description: glyA Location: 342 2 3-35471 bp Feature: gene Location: 35622-36863 bp Ori: SOU87892.1 Gene: nhaP Feature: domain Description: NhaP Location: 35634-36858 bp Feature: domain Description: NhaP Location: 35634-36858 bp Feature: gene Location: 36917-38314 bp Ori: SOU87893.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 37055-37940 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 37055-37940 bp Feature: gene Location: 38490-38912 bp Feature: gene Location: 39178-39729 bp Ori: SOU87895.1 Feature: domain Description: LPLAT_ABO13168-like Location: 39199-39679 bp Feature: domain Description: LPLAT_ABO13168-like Location: 39199-39679 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT glyA (PRK00011), NhaP (COG0025), RVT-UG2, LPLAT_ABO13168-like (cd07988)

Seq: OESZ01000008.1 (20827 bp)
Overview 1 RT 1: 3356-10256 bp Neighborhood of RT #1 [3356, 10312] HsdM PRK09737 RMtype1_S_SonII-TRD2-CR2_like PRK09737 RMtype1_S_SonII-TRD2-CR2_like RVT-UG2 YhcG YhcG_C Feature: gene Location: 3356-4792 bp Ori: SOU86443.1 Gene: hsdM Feature: domain Description: HsdM Location: 3365-4772 bp Feature: domain Description: HsdM Location: 3 3 65-4772 bp Feature: gene Location: 4795-6501 bp Ori: SOU86444.1 Feature: domain Description: PRK09737 Location: 4855-4972 bp Feature: domain Description: PRK0973 7 Location: 4855-4972 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 5062-5608 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 5062-5608 bp Feature: domain Description: PRK09737 Location: 5680-5818 bp Feature: domain Description: PRK0973 7 Location: 5680-5818 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 5911-6481 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 5911-6481 bp Feature: gene Location: 6906-8501 bp Ori: SOU86445.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 7161-8157 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 7161-8157 bp Feature: gene Location: 8535-9278 bp Feature: gene Location: 9278-10312 bp Ori: SOU86447.1 Feature: domain Description: YhcG Location: 9341-9623 bp Feature: domain Description: YhcG Location: 93 41-9623 bp Feature: domain Description: YhcG_C Location: 9797-10256 bp Feature: domain Description: YhcG_C Location: 9797-10256 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), PRK09737 (type I restriction-modification system specificity subunit), RMtype1_S_SonII-TRD2-CR2_like (cd17246), RVT-UG2, YhcG (COG4804), YhcG_C

Seq: OESZ01000039.1 (2582 bp)
Overview 1 RT 1: 284-1094 bp Neighborhood of RT #1 [284, 1912] RVT-UG12 Feature: gene Location: 284-1912 bp Ori: SOU87333.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 644-1094 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 64 4 -1094 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12