myRT

myRT report for GCA_900239495.1_TNO010_V1

Download annotations/find similar RTs

Seq: OENE01000052.1 (21669 bp)
Overview 1 RT 1: 4745-11399 bp Neighborhood of RT #1 [4745, 11455] HsdM RMtype1_S_StySKI-TRD2-CR2_like PRK09737 RMtype1_S_StySKI-TRD2-CR2_like RVT-UG2 YhcG YhcG_C Feature: gene Location: 4745-6181 bp Feature: domain Description: HsdM Location: 4754-6161 bp Feature: domain Description: HsdM Location: 4754-61 61 bp Feature: gene Location: 6184-7896 bp Feature: domain Description: RMtype1_S_StySKI-TRD2-CR2_like Location: 6757-6976 bp Feature: domain Description: RMtype1 _S_StySKI-TRD2-CR2_like Location: 6757-6976 bp Feature: domain Description: PRK09737 Location: 7069-7213 bp Feature: domain Description: PRK09737 Location: 7069-721 3 bp Feature: domain Description: RMtype1_S_StySKI-TRD2-CR2_like Location: 7300-7870 bp Feature: domain Description: RMtype1 _S_StySKI-TRD2-CR2_like Location: 7300-7870 bp Feature: gene Location: 8313-9890 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 8568-9546 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 8568-9546 bp Feature: gene Location: 9924-10667 bp Feature: gene Location: 10667-11455 bp Feature: domain Description: YhcG Location: 10676-10871 bp Feature: domain Description: YhcG Location: 1 0676-1 0871 bp Feature: domain Description: YhcG_C Location: 10940-11399 bp Feature: domain Description: YhcG_C Location: 1 0940-1 1 399 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RMtype1_S_StySKI-TRD2-CR2_like (cd17259), PRK09737 (type I restriction-modification system specificity subunit), RVT-UG2, YhcG (COG4804), YhcG_C

Seq: OENE01000004.1 (341695 bp)
Overview 1 RT 1: 63512-71840 bp Neighborhood of RT #1 [63512, 71848] WGR_DNA_ligase SWIM RVT-Retrons fabG RhaT Feature: gene Location: 63512-66538 bp Feature: domain Description: WGR_DNA_ligase Location: 63530-63746 bp Feature: domain Description: WGR_DNA_ligase Location: 63530-63746 bp Feature: gene Location: 66553-68184 bp Feature: domain Description: SWIM Location: 68062-68155 bp Feature: domain Description: SWIM Location: 68062 -68155 bp Feature: gene Location: 68447-69985 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 68996-69614 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 68996-69614 bp Feature: gene Location: 70064-70780 bp Feature: domain Description: fabG Location: 70067-70778 bp Feature: domain Description: fabG Location: 70067-70778 bp Feature: gene Location: 70937-71848 bp Feature: domain Description: RhaT Location: 70949-71840 bp Feature: domain Description: RhaT Location: 70949-71840 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WGR_DNA_ligase (cd07998), SWIM (pfam04434), RVT-Retrons, fabG (PRK12825), RhaT (TIGR00776)

Seq: OENE01000013.1 (111968 bp)
Overview 1 RT 1: 38448-44643 bp Neighborhood of RT #1 [38448, 44693] glyA NhaP RVT-UG2 LPLAT_ABO13168-like Feature: gene Location: 38448-39770 bp Feature: domain Description: glyA Location: 38490-39750 bp Feature: domain Description: glyA Location: 3 8490-3 9750 bp Feature: gene Location: 39922-41163 bp Feature: domain Description: NhaP Location: 39934-41158 bp Feature: domain Description: NhaP Location: 3 993 4-41158 bp Feature: gene Location: 41204-42706 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 41462-42338 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 41462-423 3 8 bp Feature: gene Location: 43180-43881 bp Feature: gene Location: 44142-44693 bp Feature: domain Description: LPLAT_ABO13168-like Location: 44163-44643 bp Feature: domain Description: LPLAT_ABO13 168-like Location: 44163 -44643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT glyA (PRK00011), NhaP (COG0025), RVT-UG2, LPLAT_ABO13168-like (cd07988)