myRT

myRT report for GCA_900243045.1_PRJEB14662

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Seq: LT969518.1 (3305415 bp)
Overview 1 RT 1: 1012478-1019997 bp 2 RT 2: 1215337-1221421 bp 3 RT 3: 1630441-1635277 bp 4 RT 4: 1669122-1673354 bp 5 RT 5: 1847533-1853255 bp 6 RT 6: 1857204-1864262 bp 7 RT 7: 2285137-2292016 bp 8 RT 8: 2585742-2591742 bp 9 RT 9: 3258477-3261973 bp Neighborhood of RT #1 [1012478, 1020002] LacZ LacZ PBP2_AlgQ_like_3 RVT-GII GIIM UgpE Neighborhood of RT #2 [1215337, 1221426] YesM YesN YesN RVT-GII GIIM UgpE Neighborhood of RT #3 [1630441, 1635285] HTH_XRE RVT-GII MhpC BaeS Neighborhood of RT #4 [1669122, 1673354] MdlB HTH_BltR BltR2 RVT-GII GIIM group_II_RT_mat Neighborhood of RT #5 [1847533, 1853255] Spr Cyt_C5_DNA_methylase RVT-GII HNHc Neighborhood of RT #6 [1857204, 1864262] RVT-GII Intron_maturas2 HNHc VirD4 RVT-GII Intron_maturas2 HNHc Neighborhood of RT #7 [2285137, 2292021] dCache_1 YesN PBP2_AlgQ_like_2 RVT-GII GIIM UgpE Neighborhood of RT #8 [2585742, 2591747] sulfatase_like PBP2_AlgQ_like_2 RVT-GII GIIM UgpE Neighborhood of RT #9 [3258477, 3262002] RpoE HipB RVT-GII ZupT MdlB Feature: gene Location: 1012478-1015342 bp Feature: domain Description: LacZ Location: 1012514-1012901 bp Feature: domain Description: LacZ Location: 1 01 251 4-1 01 2901 bp Feature: domain Description: LacZ Location: 1013291-1013771 bp Feature: domain Description: LacZ Location: 1 01 3291 -1 01 3771 bp Feature: gene Location: 1015429-1017189 bp Feature: domain Description: PBP2_AlgQ_like_3 Location: 1015618-1017154 bp Feature: domain Description: PBP2_AlgQ_like_3 Location: 1 01 561 8-1 01 71 54 bp Feature: gene Location: 1017323-1018621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1017578-1018268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 7578-1 01 8268 bp Feature: domain Description: GIIM Note: maturase Location: 1018334-1018556 bp Feature: domain Description: GIIM Note: maturase Location: 1 01 8334-1 01 8556 bp Feature: gene Location: 1018718-1018900 bp Feature: gene Location: 1019115-1020002 bp Feature: domain Description: UgpE Location: 1019163-1019997 bp Feature: domain Description: UgpE Location: 1 01 91 63-1 01 9997 bp Feature: gene Location: 1215337-1217046 bp Feature: domain Description: YesM Location: 1216183-1217011 bp Feature: domain Description: YesM Location: 1 21 61 83-1 21 701 1 bp Feature: gene Location: 1217080-1218645 bp Feature: domain Description: YesN Location: 1217140-1217527 bp Feature: domain Description: YesN Location: 1 21 71 40-1 21 7527 bp Feature: domain Description: YesN Location: 1218301-1218634 bp Feature: domain Description: YesN Location: 1 21 8301 -1 21 8634 bp Feature: gene Location: 1218723-1220021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1218978-1219668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 8978-1 21 9668 bp Feature: domain Description: GIIM Note: maturase Location: 1219734-1219956 bp Feature: domain Description: GIIM Note: maturase Location: 1 21 9734-1 21 9956 bp Feature: gene Location: 1220118-1220300 bp Feature: gene Location: 1220515-1221426 bp Feature: domain Description: UgpE Location: 1220569-1221421 bp Feature: domain Description: UgpE Location: 1 220569-1 221 421 bp Feature: gene Location: 1630441-1630797 bp Feature: gene Location: 1631312-1631593 bp Feature: domain Description: HTH_XRE Location: 1631330-1631489 bp Feature: domain Description: HTH_XRE Location: 1 631 330-1 631 489 bp Feature: gene Location: 1631791-1632009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1631800-1631977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 631 800-1 631 977 bp Feature: gene Location: 1632239-1633579 bp Feature: domain Description: MhpC Location: 1632638-1633451 bp Feature: domain Description: MhpC Location: 1 632638-1 633451 bp Feature: gene Location: 1633705-1635285 bp Feature: domain Description: BaeS Location: 1634512-1635277 bp Feature: domain Description: BaeS Location: 1 63451 2-1 635277 bp Feature: gene Location: 1669122-1670852 bp Feature: domain Description: MdlB Location: 1669134-1670838 bp Feature: domain Description: MdlB Location: 1 6691 34-1 670838 bp Feature: gene Location: 1670960-1671763 bp Feature: domain Description: HTH_BltR Location: 1670984-1671263 bp Feature: domain Description: HTH_BltR Location: 1 670984-1 671 263 bp Feature: domain Description: BltR2 Location: 1671560-1671755 bp Feature: domain Description: BltR2 Location: 1 671 560-1 671 755 bp Feature: gene Location: 1671937-1672704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1671943-1672261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 671 943-1 672261 bp Feature: domain Description: GIIM Note: maturase Location: 1672315-1672543 bp Feature: domain Description: GIIM Note: maturase Location: 1 67231 5-1 672543 bp Feature: gene Location: 1672758-1673102 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1672938-1673061 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 672938-1 673061 bp Feature: gene Location: 1673190-1673354 bp Feature: gene Location: 1847533-1849488 bp Feature: domain Description: Spr Location: 1849114-1849471 bp Feature: domain Description: Spr Location: 1 8491 1 4-1 849471 bp Feature: gene Location: 1849476-1850396 bp Feature: domain Description: Cyt_C5_DNA_methylase Location: 1849494-1849980 bp Feature: domain Description: Cyt_C5_DNA_methylase Location: 1 849494-1 849980 bp Feature: gene Location: 1850784-1852664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1851117-1851834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 851 1 1 7-1 851 834 bp Feature: domain Description: HNHc Note: nucleases Location: 1852416-1852554 bp Feature: domain Description: HNHc Note: nucleases Location: 1 85241 6-1 852554 bp Feature: gene Location: 1852863-1853111 bp Feature: gene Location: 1853121-1853255 bp Feature: gene Location: 1857204-1857431 bp Feature: gene Location: 1857451-1857804 bp Feature: gene Location: 1857915-1859777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1858245-1859061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 858245-1 859061 bp Feature: domain Description: Intron_maturas2 Location: 1859139-1859436 bp Feature: domain Description: Intron_maturas2 Location: 1 8591 39-1 859436 bp Feature: domain Description: HNHc Note: nucleases Location: 1859598-1859757 bp Feature: domain Description: HNHc Note: nucleases Location: 1 859598-1 859757 bp Feature: gene Location: 1860254-1861294 bp Feature: domain Description: VirD4 Location: 1860296-1861259 bp Feature: domain Description: VirD4 Location: 1 860296-1 861 259 bp Feature: gene Location: 1861385-1863202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1861649-1862468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 861 649-1 862468 bp Feature: domain Description: Intron_maturas2 Location: 1862540-1862843 bp Feature: domain Description: Intron_maturas2 Location: 1 862540-1 862843 bp Feature: domain Description: HNHc Note: nucleases Location: 1863023-1863167 bp Feature: domain Description: HNHc Note: nucleases Location: 1 863023-1 8631 67 bp Feature: gene Location: 1863489-1863629 bp Feature: gene Location: 1863762-1864262 bp Feature: gene Location: 2285137-2287428 bp Feature: domain Description: dCache_1 Location: 2285293-2286001 bp Feature: domain Description: dCache_1 Location: 2285293-2286001 bp Feature: domain Description: YesN Location: 2286583-2287393 bp Feature: domain Description: YesN Location: 2286583-2287393 bp Feature: gene Location: 2287480-2289135 bp Feature: domain Description: PBP2_AlgQ_like_2 Location: 2287663-2289121 bp Feature: domain Description: PBP2_AlgQ_like_2 Location: 2287663-22891 21 bp Feature: gene Location: 2289345-2290643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2289600-2290290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2289600-2290290 bp Feature: domain Description: GIIM Note: maturase Location: 2290356-2290578 bp Feature: domain Description: GIIM Note: maturase Location: 2290356-2290578 bp Feature: gene Location: 2290740-2290922 bp Feature: gene Location: 2291137-2292021 bp Feature: domain Description: UgpE Location: 2291167-2292016 bp Feature: domain Description: UgpE Location: 2291 1 67-229201 6 bp Feature: gene Location: 2585742-2587202 bp Feature: domain Description: sulfatase_like Location: 2585745-2587173 bp Feature: domain Description: sulfatase_like Location: 2585745-25871 73 bp Feature: gene Location: 2587236-2588888 bp Feature: domain Description: PBP2_AlgQ_like_2 Location: 2587410-2588871 bp Feature: domain Description: PBP2_AlgQ_like_2 Location: 258741 0-2588871 bp Feature: gene Location: 2589047-2590168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2589125-2589815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25891 25-258981 5 bp Feature: domain Description: GIIM Note: maturase Location: 2589881-2590103 bp Feature: domain Description: GIIM Note: maturase Location: 2589881 -25901 03 bp Feature: gene Location: 2590290-2590631 bp Feature: gene Location: 2590839-2591747 bp Feature: domain Description: UgpE Location: 2590884-2591742 bp Feature: domain Description: UgpE Location: 2590884-2591 742 bp Feature: gene Location: 3258477-3258929 bp Feature: domain Description: RpoE Location: 3258519-3258918 bp Feature: domain Description: RpoE Location: 325851 9-325891 8 bp Feature: gene Location: 3259367-3259717 bp Feature: domain Description: HipB Location: 3259403-3259640 bp Feature: domain Description: HipB Location: 3259403-3259640 bp Feature: gene Location: 3260092-3260670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3260272-3260611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3260272-326061 1 bp Feature: gene Location: 3260789-3261556 bp Feature: domain Description: ZupT Location: 3260807-3261554 bp Feature: domain Description: ZupT Location: 3260807-3261 554 bp Feature: gene Location: 3261670-3262002 bp Feature: domain Description: MdlB Location: 3261802-3261973 bp Feature: domain Description: MdlB Location: 3261 802-3261 973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LT969517.1 (3307300 bp)
Overview 1 RT 1: 10912-15072 bp 2 RT 2: 28266-35024 bp 3 RT 3: 355017-359076 bp 4 RT 4: 381373-387525 bp 5 RT 5: 1261168-1267357 bp 6 RT 6: 1280526-1285742 bp 7 RT 7: 1723539-1728935 bp 8 RT 8: 1940868-1946676 bp 9 RT 9: 2280022-2286545 bp 10 RT 10: 2563443-2570377 bp 11 RT 11: 2585727-2596869 bp 12 RT 12: 2874112-2878691 bp Neighborhood of RT #1 [10912, 15072] Maff2 RVT-GII Intron_maturas2 HNHc TraG-D_C Neighborhood of RT #2 [28266, 35491] SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 T4SS-DNA_transf RVT-GII Intron_maturas2 HNHc DnaG DUF3991 Toprim_2 AAA_25 Neighborhood of RT #3 [355017, 359076] TnpW TraG-D_C RVT-GII Intron_maturas2 HNHc Neighborhood of RT #4 [381373, 387554] VirB4_CagE VirB4_CagE RVT-GII HNHc N6_N4_Mtase Neighborhood of RT #5 [1261168, 1267357] RVT-GII KOG4768 VirD4 RVT-GII Intron_maturas2 HNHc Neighborhood of RT #6 [1280526, 1285742] TraC-F-type RVT-GII HNHc Neighborhood of RT #7 [1723539, 1729213] DUF3847 MobA_MobL RVT-GII GIIM dnaG COG5545 Neighborhood of RT #8 [1940868, 1946705] UgpE RVT-GII GIIM Glyco_hydro_42 Glyco_hydro_42M 2-Hacid_dh_4 Neighborhood of RT #9 [2280022, 2286586] UgpE RVT-GII GIIM Glyco_hydro_106 HAD_YbiV-Like Neighborhood of RT #10 [2563443, 2570667] DnaG DUF3991 Toprim_2 AAA_25 RVT-GII Intron_maturas2 HNHc T4SS-DNA_transf SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 Neighborhood of RT #11 [2585727, 2596871] TraG-D_C RVT-GII Intron_maturas2 HNHc Maff2 VirB4_CagE TraC-F-type RVT-GII HNHc DUF3851 Neighborhood of RT #12 [2874112, 2878691] UPRTase RVT-Retrons Feature: gene Location: 10912-11052 bp Feature: domain Description: Maff2 Location: 10915-11041 bp Feature: domain Description: Maff2 Location: 10915-11041 bp Feature: gene Location: 11209-11586 bp Feature: gene Location: 11697-13496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11964-12780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11964-12 780 bp Feature: domain Description: Intron_maturas2 Location: 12858-13155 bp Feature: domain Description: Intron_maturas2 Location: 12 858-13155 bp Feature: domain Description: HNHc Note: nucleases Location: 13317-13476 bp Feature: domain Description: HNHc Note: nucleases Location: 13317-13476 bp Feature: gene Location: 14035-14511 bp Feature: domain Description: TraG-D_C Location: 14224-14476 bp Feature: domain Description: TraG-D_C Location: 142 2 4-14476 bp Feature: gene Location: 14665-15072 bp Feature: gene Location: 28266-30146 bp Feature: domain Description: SR_TndX_transposase Location: 28290-28698 bp Feature: domain Description: SR_TndX_transposase Location: 2 82 90-2 8698 bp Feature: domain Description: Recombinase Location: 28797-29160 bp Feature: domain Description: Recombinase Location: 2 8797-2 9160 bp Feature: domain Description: Zn_ribbon_recom Location: 29202-29385 bp Feature: domain Description: Zn_ribbon_recom Location: 2 92 02 -2 9385 bp Feature: domain Description: DUF4368 Location: 29670-29856 bp Feature: domain Description: DUF4368 Location: 2 9670-2 9856 bp Feature: gene Location: 30219-30785 bp Feature: domain Description: T4SS-DNA_transf Location: 30390-30693 bp Feature: domain Description: T4SS-DNA_transf Location: 30390-30693 bp Feature: gene Location: 30876-32693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31140-31959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31140-31959 bp Feature: domain Description: Intron_maturas2 Location: 32031-32334 bp Feature: domain Description: Intron_maturas2 Location: 32 031-32 334 bp Feature: domain Description: HNHc Note: nucleases Location: 32514-32658 bp Feature: domain Description: HNHc Note: nucleases Location: 32 514-32 658 bp Feature: gene Location: 32980-33120 bp Feature: gene Location: 33554-35491 bp Feature: domain Description: DnaG Location: 33749-33848 bp Feature: domain Description: DnaG Location: 33749-33848 bp Feature: domain Description: DUF3991 Location: 33932-34139 bp Feature: domain Description: DUF3991 Location: 33932 -34139 bp Feature: domain Description: Toprim_2 Location: 34163-34430 bp Feature: domain Description: Toprim_2 Location: 34163-34430 bp Feature: domain Description: AAA_25 Location: 34514-35024 bp Feature: domain Description: AAA_2 5 Location: 34514-3502 4 bp Feature: gene Location: 355017-355175 bp Feature: domain Description: TnpW Location: 355062-355161 bp Feature: domain Description: TnpW Location: 355062 -355161 bp Feature: gene Location: 355298-355762 bp Feature: domain Description: TraG-D_C Location: 355475-355727 bp Feature: domain Description: TraG-D_C Location: 355475-35572 7 bp Feature: gene Location: 356239-358101 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 356569-357385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 356569-357385 bp Feature: domain Description: Intron_maturas2 Location: 357463-357760 bp Feature: domain Description: Intron_maturas2 Location: 357463-357760 bp Feature: domain Description: HNHc Note: nucleases Location: 357922-358081 bp Feature: domain Description: HNHc Note: nucleases Location: 35792 2 -358081 bp Feature: gene Location: 358293-358556 bp Feature: gene Location: 358927-359076 bp Feature: gene Location: 381373-383595 bp Feature: domain Description: VirB4_CagE Location: 381502-381940 bp Feature: domain Description: VirB4_CagE Location: 381502 -381940 bp Feature: domain Description: VirB4_CagE Location: 382177-383569 bp Feature: domain Description: VirB4_CagE Location: 382 177-383569 bp Feature: gene Location: 383880-384128 bp Feature: gene Location: 384327-386207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 384660-385377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 384660-385377 bp Feature: domain Description: HNHc Note: nucleases Location: 385959-386097 bp Feature: domain Description: HNHc Note: nucleases Location: 385959-386097 bp Feature: gene Location: 386389-386598 bp Feature: gene Location: 386595-387554 bp Feature: domain Description: N6_N4_Mtase Location: 386673-387525 bp Feature: domain Description: N6_N4_Mtase Location: 386673-38752 5 bp Feature: gene Location: 1261168-1261434 bp Feature: gene Location: 1261473-1261607 bp Feature: gene Location: 1261617-1262801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1261737-1262556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 61737-12 62 556 bp Feature: gene Location: 1262877-1263290 bp Feature: domain Description: KOG4768 Location: 1262886-1263279 bp Feature: domain Description: KOG4768 Location: 12 62 886-12 632 79 bp Feature: gene Location: 1263381-1264409 bp Feature: domain Description: VirD4 Location: 1263387-1264374 bp Feature: domain Description: VirD4 Location: 12 63387-12 64374 bp Feature: gene Location: 1264886-1266748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1265216-1266032 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 652 16-12 66032 bp Feature: domain Description: Intron_maturas2 Location: 1266110-1266407 bp Feature: domain Description: Intron_maturas2 Location: 12 66110-12 66407 bp Feature: domain Description: HNHc Note: nucleases Location: 1266569-1266728 bp Feature: domain Description: HNHc Note: nucleases Location: 12 66569-12 6672 8 bp Feature: gene Location: 1266940-1267197 bp Feature: gene Location: 1267190-1267357 bp Feature: gene Location: 1280526-1282739 bp Feature: domain Description: TraC-F-type Location: 1281351-1282728 bp Feature: domain Description: TraC-F-type Location: 12 81351-12 82 72 8 bp Feature: gene Location: 1283024-1283272 bp Feature: gene Location: 1283471-1284979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1283804-1284521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 83804-12 8452 1 bp Feature: gene Location: 1285007-1285351 bp Feature: domain Description: HNHc Note: nucleases Location: 1285103-1285241 bp Feature: domain Description: HNHc Note: nucleases Location: 12 85103-12 852 41 bp Feature: gene Location: 1285533-1285742 bp Feature: gene Location: 1723539-1723856 bp Feature: domain Description: DUF3847 Location: 1723551-1723794 bp Feature: domain Description: DUF3847 Location: 172 3551-172 3794 bp Feature: gene Location: 1724000-1725331 bp Feature: domain Description: MobA_MobL Location: 1724006-1724597 bp Feature: domain Description: MobA_MobL Location: 172 4006-172 4597 bp Feature: gene Location: 1725886-1727169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1726090-1726705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172 6090-172 6705 bp Feature: domain Description: GIIM Note: maturase Location: 1726765-1726996 bp Feature: domain Description: GIIM Note: maturase Location: 172 6765-172 6996 bp Feature: gene Location: 1727248-1727988 bp Feature: domain Description: dnaG Location: 1727320-1727563 bp Feature: domain Description: dnaG Location: 172 732 0-172 7563 bp Feature: gene Location: 1727882-1729213 bp Feature: domain Description: COG5545 Location: 1727924-1728935 bp Feature: domain Description: COG5545 Location: 172 792 4-172 8935 bp Feature: gene Location: 1940868-1941731 bp Feature: domain Description: UgpE Location: 1940916-1941726 bp Feature: domain Description: UgpE Location: 1940916-194172 6 bp Feature: gene Location: 1941946-1942128 bp Feature: gene Location: 1942225-1943523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1942480-1943170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1942 480-1943170 bp Feature: domain Description: GIIM Note: maturase Location: 1943236-1943458 bp Feature: domain Description: GIIM Note: maturase Location: 19432 36-1943458 bp Feature: gene Location: 1943608-1945716 bp Feature: domain Description: Glyco_hydro_42 Location: 1943701-1944796 bp Feature: domain Description: Glyco_hydro_42 Location: 1943701-1944796 bp Feature: domain Description: Glyco_hydro_42M Location: 1944934-1945408 bp Feature: domain Description: Glyco_hydro_42 M Location: 1944934-1945408 bp Feature: gene Location: 1945719-1946705 bp Feature: domain Description: 2-Hacid_dh_4 Location: 1945755-1946676 bp Feature: domain Description: 2 -Hacid_dh_4 Location: 1945755-1946676 bp Feature: gene Location: 2280022-2280921 bp Feature: domain Description: UgpE Location: 2280040-2280916 bp Feature: domain Description: UgpE Location: 2 2 80040-2 2 80916 bp Feature: gene Location: 2281136-2281318 bp Feature: gene Location: 2281415-2282713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2281670-2282360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 81670-2 2 82 360 bp Feature: domain Description: GIIM Note: maturase Location: 2282426-2282648 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 82 42 6-2 2 82 648 bp Feature: gene Location: 2282791-2285559 bp Feature: domain Description: Glyco_hydro_106 Location: 2284090-2284927 bp Feature: domain Description: Glyco_hydro_106 Location: 2 2 84090-2 2 8492 7 bp Feature: gene Location: 2285792-2286586 bp Feature: domain Description: HAD_YbiV-Like Location: 2285810-2286545 bp Feature: domain Description: HAD_YbiV-Like Location: 2 2 85810-2 2 86545 bp Feature: gene Location: 2563443-2565326 bp Feature: domain Description: DnaG Location: 2563602-2563695 bp Feature: domain Description: DnaG Location: 2 563602 -2 563695 bp Feature: domain Description: DUF3991 Location: 2563767-2563974 bp Feature: domain Description: DUF3991 Location: 2 563767-2 563974 bp Feature: domain Description: Toprim_2 Location: 2563998-2564265 bp Feature: domain Description: Toprim_2 Location: 2 563998-2 5642 65 bp Feature: domain Description: AAA_25 Location: 2564340-2564859 bp Feature: domain Description: AAA_2 5 Location: 2 564340-2 564859 bp Feature: gene Location: 2565934-2566200 bp Feature: gene Location: 2566239-2568056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2566503-2567322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 566503-2 56732 2 bp Feature: domain Description: Intron_maturas2 Location: 2567394-2567697 bp Feature: domain Description: Intron_maturas2 Location: 2 567394-2 567697 bp Feature: domain Description: HNHc Note: nucleases Location: 2567877-2568021 bp Feature: domain Description: HNHc Note: nucleases Location: 2 567877-2 56802 1 bp Feature: gene Location: 2568147-2568713 bp Feature: domain Description: T4SS-DNA_transf Location: 2568318-2568642 bp Feature: domain Description: T4SS-DNA_transf Location: 2 568318-2 568642 bp Feature: gene Location: 2568787-2570667 bp Feature: domain Description: SR_TndX_transposase Location: 2568811-2569219 bp Feature: domain Description: SR_TndX_transposase Location: 2 568811-2 5692 19 bp Feature: domain Description: Recombinase Location: 2569318-2569675 bp Feature: domain Description: Recombinase Location: 2 569318-2 569675 bp Feature: domain Description: Zn_ribbon_recom Location: 2569723-2569906 bp Feature: domain Description: Zn_ribbon_recom Location: 2 56972 3-2 569906 bp Feature: domain Description: DUF4368 Location: 2570191-2570377 bp Feature: domain Description: DUF4368 Location: 2 570191-2 570377 bp Feature: gene Location: 2585727-2586092 bp Feature: gene Location: 2586210-2586731 bp Feature: domain Description: TraG-D_C Location: 2586444-2586696 bp Feature: domain Description: TraG-D_C Location: 2 586444-2 586696 bp Feature: gene Location: 2587208-2589070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2587538-2588354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 587538-2 588354 bp Feature: domain Description: Intron_maturas2 Location: 2588432-2588729 bp Feature: domain Description: Intron_maturas2 Location: 2 588432 -2 58872 9 bp Feature: domain Description: HNHc Note: nucleases Location: 2588891-2589050 bp Feature: domain Description: HNHc Note: nucleases Location: 2 588891-2 589050 bp Feature: gene Location: 2589262-2589495 bp Feature: gene Location: 2589712-2589930 bp Feature: domain Description: Maff2 Location: 2589715-2589922 bp Feature: domain Description: Maff2 Location: 2 589715-2 58992 2 bp Feature: gene Location: 2591302-2593479 bp Feature: domain Description: VirB4_CagE Location: 2591392-2591842 bp Feature: domain Description: VirB4_CagE Location: 2 591392 -2 591842 bp Feature: domain Description: TraC-F-type Location: 2592121-2593468 bp Feature: domain Description: TraC-F-type Location: 2 592 12 1-2 593468 bp Feature: gene Location: 2593764-2594012 bp Feature: gene Location: 2594211-2596091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2594544-2595261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 594544-2 5952 61 bp Feature: domain Description: HNHc Note: nucleases Location: 2595843-2595981 bp Feature: domain Description: HNHc Note: nucleases Location: 2 595843-2 595981 bp Feature: gene Location: 2596273-2596491 bp Feature: gene Location: 2596491-2596871 bp Feature: domain Description: DUF3851 Location: 2596497-2596869 bp Feature: domain Description: DUF3851 Location: 2 596497-2 596869 bp Feature: gene Location: 2874112-2874978 bp Feature: domain Description: UPRTase Location: 2874547-2874724 bp Feature: domain Description: UPRTase Location: 2 874547-2 87472 4 bp Feature: gene Location: 2874987-2875280 bp Feature: gene Location: 2875556-2876599 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2875781-2876336 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 875781-2 876336 bp Feature: gene Location: 2877073-2877744 bp Feature: gene Location: 2877807-2878691 bp Sorry, your 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Associated domains:myRT

Seq: LT969515.1 (164254 bp)
Overview 1 RT 1: 68525-73929 bp Neighborhood of RT #1 [68525, 74153] Beta_helix Beta_helix Beta_helix Flg_new RVT-Retrons VOC HTH_TioE_rpt1 HTH_TioE_rpt1 Feature: gene Location: 68525-71158 bp Feature: domain Description: Beta_helix Location: 68843-69368 bp Feature: domain Description: Beta_helix Location: 68843 -693 68 bp Feature: domain Description: Beta_helix Location: 69716-70175 bp Feature: domain Description: Beta_helix Location: 69716-70175 bp Feature: domain Description: Beta_helix Location: 70175-70457 bp Feature: domain Description: Beta_helix Location: 70175-70457 bp Feature: domain Description: Flg_new Location: 70853-71051 bp Feature: domain Description: Flg_new Location: 70853 -71051 bp Feature: gene Location: 71470-71601 bp Feature: gene Location: 71741-72724 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 71912-72464 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 71912-72464 bp Feature: gene Location: 72837-73274 bp Feature: domain Description: VOC Location: 72867-73218 bp Feature: domain Description: VOC Location: 72867-73 218 bp Feature: gene Location: 73398-74153 bp Feature: domain Description: HTH_TioE_rpt1 Location: 73410-73695 bp Feature: domain Description: HTH_TioE_rpt1 Location: 73 410-73 695 bp Feature: domain Description: HTH_TioE_rpt1 Location: 73782-73929 bp Feature: domain Description: HTH_TioE_rpt1 Location: 73 782-73 929 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LT969516.1 (305215 bp)
Overview 1 RT 1: 256495-259250 bp Neighborhood of RT #1 [256495, 259250] HTH_XRE HipB RVT-GII GIIM Feature: gene Location: 256495-256947 bp Feature: domain Description: HTH_XRE Location: 256555-256726 bp Feature: domain Description: HTH_XRE Location: 256555-256726 bp Feature: gene Location: 256832-257272 bp Feature: domain Description: HipB Location: 256847-257072 bp Feature: domain Description: HipB Location: 25684 7-257072 bp Feature: gene Location: 257389-258687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 257644-258334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25764 4 -258334 bp Feature: domain Description: GIIM Note: maturase Location: 258400-258622 bp Feature: domain Description: GIIM Note: maturase Location: 2584 00-258622 bp Feature: gene Location: 258715-258852 bp Feature: gene Location: 258915-259250 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT