myRT

myRT report for GCA_900243435.1_ASM90024343v1

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Seq: OOFM01000003.1 (266969 bp)
Overview 1 RT 1: 43594-49767 bp 2 RT 2: 244004-250734 bp Neighborhood of RT #1 [43594, 49767] PHA02517 RVT-GII GIIM Phage_int_SAM_1 INT_RitC_C_like INT_RitB_C_like Phage_int_SAM_1 INT_RitA_C_like RVT-GII Neighborhood of RT #2 [244004, 250895] HTH_Tnp_1 RVT-GII GIIM Phage_int_SAM_1 INT_RitC_C_like INT_RitB_C_like Phage_int_SAM_1 INT_RitA_C_like RVT-GII HTH_32 Feature: gene Location: 43594-43839 bp Feature: gene Location: 43841-44431 bp Feature: domain Description: PHA02517 Location: 43940-44429 bp Feature: domain Description: PHA0251 7 Location: 43940-44429 bp Feature: gene Location: 44400-45236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44403-44715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44403-4471 5 bp Feature: domain Description: GIIM Note: maturase Location: 44787-45015 bp Feature: domain Description: GIIM Note: maturase Location: 44787-4501 5 bp Feature: gene Location: 45359-46363 bp Feature: domain Description: Phage_int_SAM_1 Location: 45404-45647 bp Feature: domain Description: Phage_int_SAM_1 Location: 45404-45647 bp Feature: domain Description: INT_RitC_C_like Location: 45734-46283 bp Feature: domain Description: INT_RitC_C_like Location: 45734-46283 bp Feature: gene Location: 46353-47330 bp Feature: domain Description: INT_RitB_C_like Location: 46686-47268 bp Feature: domain Description: INT_RitB_C_like Location: 46686-47268 bp Feature: gene Location: 47330-48556 bp Feature: domain Description: Phage_int_SAM_1 Location: 47672-47903 bp Feature: domain Description: Phage_int_SAM_1 Location: 47672-47903 bp Feature: domain Description: INT_RitA_C_like Location: 47987-48524 bp Feature: domain Description: INT_RitA_C_like Location: 47987-48524 bp Feature: gene Location: 48619-49389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48892-49291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48892-49291 bp Feature: gene Location: 49409-49537 bp Feature: gene Location: 49558-49767 bp Feature: gene Location: 244004-244270 bp Feature: domain Description: HTH_Tnp_1 Location: 244013-244217 bp Feature: domain Description: HTH_Tnp_1 Location: 24401 3-24421 7 bp Feature: gene Location: 244477-244650 bp Feature: gene Location: 244814-245650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 244817-245129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24481 7-2451 29 bp Feature: domain Description: GIIM Note: maturase Location: 245201-245429 bp Feature: domain Description: GIIM Note: maturase Location: 245201 -245429 bp Feature: gene Location: 245773-246777 bp Feature: domain Description: Phage_int_SAM_1 Location: 245818-246061 bp Feature: domain Description: Phage_int_SAM_1 Location: 24581 8-246061 bp Feature: domain Description: INT_RitC_C_like Location: 246148-246697 bp Feature: domain Description: INT_RitC_C_like Location: 2461 48-246697 bp Feature: gene Location: 246767-247744 bp Feature: domain Description: INT_RitB_C_like Location: 247100-247682 bp Feature: domain Description: INT_RitB_C_like Location: 2471 00-247682 bp Feature: gene Location: 247744-248970 bp Feature: domain Description: Phage_int_SAM_1 Location: 248086-248317 bp Feature: domain Description: Phage_int_SAM_1 Location: 248086-24831 7 bp Feature: domain Description: INT_RitA_C_like Location: 248401-248938 bp Feature: domain Description: INT_RitA_C_like Location: 248401 -248938 bp Feature: gene Location: 249033-249806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 249306-249708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 249306-249708 bp Feature: gene Location: 249975-250181 bp Feature: gene Location: 250407-250895 bp Feature: domain Description: HTH_32 Location: 250512-250734 bp Feature: domain Description: HTH_32 Location: 25051 2-250734 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), INT_RitB_C_like (cd00797), INT_RitA_C_like (cd01188), HTH_Tnp_1 (pfam01527), HTH_32 (pfam13565)