myRT

myRT report for GCA_900249975.1_CBM2634

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Seq: OVTA01000100.1 (4230 bp)
Overview 1 RT 1: 625-2915 bp Neighborhood of RT #1 [625, 2915] RVT-GII Feature: gene Location: 625-1308 bp Feature: gene Location: 1117-1260 bp Feature: gene Location: 1272-2648 bp Ori: SPS02825.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1527-2217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 527-221 7 bp Feature: gene Location: 2602-2859 bp Feature: gene Location: 2721-2915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LS483233.1 (3501721 bp)
Overview 1 RT 1: 343350-349310 bp Neighborhood of RT #1 [343350, 349324] ThiD RVT_N RVT-GII GIIM HNHc AdoHcyase YvlD Feature: gene Location: 343350-344186 bp Ori: SPR97733.1 Gene: thiD Feature: domain Description: ThiD Location: 343365-344166 bp Feature: domain Description: ThiD Location: 343365-344166 bp Feature: gene Location: 344360-344623 bp Feature: gene Location: 345377-347101 bp Ori: SPR97735.1 Feature: domain Description: RVT_N Location: 345434-345677 bp Feature: domain Description: RVT_N Location: 345434-345677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 345722-346370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34572 2 -346370 bp Feature: domain Description: GIIM Note: maturase Location: 346424-346655 bp Feature: domain Description: GIIM Note: maturase Location: 34642 4-346655 bp Feature: domain Description: HNHc Note: nucleases Location: 346874-347039 bp Feature: domain Description: HNHc Note: nucleases Location: 346874-347039 bp Feature: gene Location: 347408-348826 bp Ori: SPR97736.1 Gene: ahcY Feature: domain Description: AdoHcyase Location: 347447-348821 bp Feature: domain Description: AdoHcyase Location: 347447-34882 1 bp Feature: gene Location: 348974-349324 bp Ori: SPR97737.1 Feature: domain Description: YvlD Location: 348977-349310 bp Feature: domain Description: YvlD Location: 348977-349310 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ThiD (COG0351), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), AdoHcyase (smart00996), YvlD (COG1950)

Seq: OVTA01000113.1 (2804 bp)
Overview 1 RT 1: 2-1636 bp Neighborhood of RT #1 [2, 1636] RVT-GII GIIM DUF5372 Feature: gene Location: 2-940 bp Ori: SPS02909.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17-644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17-644 bp Feature: domain Description: GIIM Note: maturase Location: 722-929 bp Feature: domain Description: GIIM Note: maturase Location: 722-929 bp Feature: gene Location: 1033-1251 bp Ori: SPS02910.1 Feature: domain Description: DUF5372 Location: 1039-1207 bp Feature: domain Description: DUF53 72 Location: 103 9-1207 bp Feature: gene Location: 1304-1636 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF5372 (pfam17342)

Seq: LS483234.1 (2672317 bp)
Overview 1 RT 1: 316468-322794 bp Neighborhood of RT #1 [316468, 322796] RVT-UG17 SLATT_5 PRK06498 Feature: gene Location: 316468-317049 bp Feature: gene Location: 317099-318211 bp Feature: gene Location: 318596-320071 bp Ori: SPS01525.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 318905-319517 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 318905-319517 bp Feature: gene Location: 320294-320935 bp Ori: SPS01526.1 Feature: domain Description: SLATT_5 Location: 320297-320909 bp Feature: domain Description: SLATT_5 Location: 320297-320909 bp Feature: gene Location: 321216-322796 bp Ori: SPS01527.1 Gene: aceA Feature: domain Description: PRK06498 Location: 321219-322794 bp Feature: domain Description: PRK064 98 Location: 321219-322794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160), PRK06498 (isocitrate lyase; Provisional)