myRT

myRT report for GCA_900290255.1_SbA1

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Seq: OMOD01000159.1 (83992 bp)
Overview 1 RT 1: 40964-50409 bp Neighborhood of RT #1 [40964, 50409] KOG2429 CadC1 TolBN TPR TPR TPR_12 TPR_2 TPR_12 TPR_19 RVT-GII GIIM LmbE Feature: gene Location: 40964-42403 bp Feature: domain Description: KOG2429 Location: 41105-42389 bp Feature: domain Description: KOG2429 Location: 41 1 05-42389 bp Feature: gene Location: 42661-45378 bp Feature: domain Description: CadC1 Location: 42697-43084 bp Feature: domain Description: CadC1 Location: 42697-43084 bp Feature: domain Description: TolBN Location: 43231-43570 bp Feature: domain Description: TolBN Location: 43231 -43570 bp Feature: domain Description: TPR Location: 43768-43924 bp Feature: domain Description: TPR Location: 43768-43924 bp Feature: domain Description: TPR Location: 43942-44203 bp Feature: domain Description: TPR Location: 43942-44203 bp Feature: domain Description: TPR_12 Location: 44287-44473 bp Feature: domain Description: TPR_1 2 Location: 44287-44473 bp Feature: domain Description: TPR_2 Location: 44503-44587 bp Feature: domain Description: TPR_2 Location: 44503-44587 bp Feature: domain Description: TPR_12 Location: 44617-44830 bp Feature: domain Description: TPR_1 2 Location: 4461 7-44830 bp Feature: domain Description: TPR_19 Location: 44887-45058 bp Feature: domain Description: TPR_1 9 Location: 44887-45058 bp Feature: gene Location: 46226-47170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46229-46754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46229-46754 bp Feature: domain Description: GIIM Note: maturase Location: 46862-47072 bp Feature: domain Description: GIIM Note: maturase Location: 46862-47072 bp Feature: gene Location: 47772-49250 bp Feature: domain Description: LmbE Location: 47901-48471 bp Feature: domain Description: LmbE Location: 47901 -48471 bp Feature: gene Location: 49363-50409 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG2429 (KOG2429, Glycosyl hydrolase, family 47 ), CadC1 (COG3710), TolBN (COG5616), TPR (smart00028), TPR_12 (pfam13424), TPR_2 (pfam07719), TPR_19 (pfam14559), RVT-GII, GIIM (pfam08388), LmbE (COG2120)

Seq: OMOD01000178.1 (26564 bp)
Overview 1 RT 1: 22950-25955 bp Neighborhood of RT #1 [22950, 26329] DPS XerC RVT-GII Feature: gene Location: 22950-23468 bp Feature: domain Description: DPS Location: 22998-23415 bp Feature: domain Description: DPS Location: 2 2 998-2 3415 bp Feature: gene Location: 23850-24755 bp Feature: domain Description: XerC Location: 23922-24669 bp Feature: domain Description: XerC Location: 2 392 2 -2 4669 bp Feature: gene Location: 25148-26329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25265-25955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 52 65-2 5955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DPS (cd01043), XerC (COG4973), RVT-GII