myRT

myRT report for GCA_900290275.1_PRJEB24605

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Seq: LT985325.1 (394755 bp)
Overview 1 RT 1: 235070-241522 bp Neighborhood of RT #1 [235070, 241522] BioF RVT-GII GIIM Feature: gene Location: 235070-236260 bp Feature: domain Description: BioF Location: 235094-236231 bp Feature: domain Description: BioF Location: 235094-236231 bp Feature: gene Location: 236572-236730 bp Feature: gene Location: 237234-238640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 237576-238194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 237576-2381 94 bp Feature: domain Description: GIIM Note: maturase Location: 238248-238452 bp Feature: domain Description: GIIM Note: maturase Location: 238248-238452 bp Feature: gene Location: 238749-240143 bp Feature: gene Location: 240170-241522 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BioF (COG0156), RVT-GII, GIIM (pfam08388)

Seq: LT985323.1 (1580321 bp)
Overview 1 RT 1: 171043-177004 bp 2 RT 2: 238049-241672 bp 3 RT 3: 297140-305935 bp 4 RT 4: 533055-541155 bp 5 RT 5: 584964-597144 bp 6 RT 6: 933490-937463 bp 7 RT 7: 1000760-1012999 bp 8 RT 8: 1373054-1380108 bp 9 RT 9: 1442769-1448929 bp Neighborhood of RT #1 [171043, 177141] MTAN LuxS RVT-GII GIIM CTP_transf_1 HflB Neighborhood of RT #2 [238049, 241672] RVT-DGRs Neighborhood of RT #3 [297140, 305955] HTH_MlrA-like_sg2 LRR_3 Glyco_hydro_20b GH20_chitobiase-like RVT-GII GIIM P-type_ATPase-Cd_Zn_Co_like KOG2233 Neighborhood of RT #4 [533055, 541175] COG3292 Reg_prop COG3292 Reg_prop Y_Y_Y HTH_ARAC tig RVT-GII GIIM PRK12879 rpmF Neighborhood of RT #5 [584964, 597149] YafY Glyco_transf_90 RVT-GII GIIM PRK00566 rpoB Neighborhood of RT #6 [933490, 937669] Cyclophil_like2 FrsA RVT-GII GIIM WrbA Neighborhood of RT #7 [1000760, 1013001] COG1373 pbuX RVT-GII GIIM RVT-GII GIIM F5_F8_type_C LacZ Ig_GlcNase PRK03818 Neighborhood of RT #8 [1373054, 1380113] AAK_UMPK-PyrH-Ec Endonuclease_1 RVT-GII GIIM FMN_bind PqqL PqqL Neighborhood of RT #9 [1442769, 1448929] DUF5017 RVT-GII GIIM AAA-ATPase_like PDDEXK_9 Feature: gene Location: 171043-171726 bp Feature: domain Description: MTAN Location: 171052-171709 bp Feature: domain Description: MTAN Location: 171052 -171709 bp Feature: gene Location: 171749-172234 bp Feature: domain Description: LuxS Location: 171758-172202 bp Feature: domain Description: LuxS Location: 171758-172 2 02 bp Feature: gene Location: 172345-173751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172687-173305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172 687-173305 bp Feature: domain Description: GIIM Note: maturase Location: 173359-173563 bp Feature: domain Description: GIIM Note: maturase Location: 173359-173563 bp Feature: gene Location: 174246-175106 bp Feature: domain Description: CTP_transf_1 Location: 174264-175089 bp Feature: domain Description: CTP_transf_1 Location: 1742 64-175089 bp Feature: gene Location: 175111-177141 bp Feature: domain Description: HflB Location: 175195-177004 bp Feature: domain Description: HflB Location: 175195-177004 bp Feature: gene Location: 238049-239425 bp Feature: gene Location: 239459-239590 bp Feature: gene Location: 239616-240866 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 239820-240564 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 3982 0-2 40564 bp Feature: gene Location: 240892-241272 bp Feature: gene Location: 241274-241672 bp Feature: gene Location: 297140-297487 bp Feature: domain Description: HTH_MlrA-like_sg2 Location: 297179-297467 bp Feature: domain Description: HTH_MlrA-like_sg2 Location: 2 97179-2 97467 bp Feature: gene Location: 297526-299715 bp Feature: domain Description: LRR_3 Location: 297739-298018 bp Feature: domain Description: LRR_3 Location: 2 97739-2 98018 bp Feature: domain Description: Glyco_hydro_20b Location: 298183-298564 bp Feature: domain Description: Glyco_hydro_2 0b Location: 2 98183-2 98564 bp Feature: domain Description: GH20_chitobiase-like Location: 298585-299656 bp Feature: domain Description: GH2 0_chitobiase-like Location: 2 98585-2 99656 bp Feature: gene Location: 299823-301229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 300165-300783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 300165-300783 bp Feature: domain Description: GIIM Note: maturase Location: 300837-301041 bp Feature: domain Description: GIIM Note: maturase Location: 300837-301041 bp Feature: gene Location: 301724-303727 bp Feature: domain Description: P-type_ATPase-Cd_Zn_Co_like Location: 301874-303722 bp Feature: domain Description: P-type_ATPase-Cd_Zn_Co_like Location: 301874-30372 2 bp Feature: gene Location: 303793-305955 bp Feature: domain Description: KOG2233 Location: 303976-305935 bp Feature: domain Description: KOG2 2 33 Location: 303976-305935 bp Feature: gene Location: 533055-536018 bp Feature: domain Description: COG3292 Location: 533076-534210 bp Feature: domain Description: COG32 92 Location: 533076-5342 10 bp Feature: domain Description: Reg_prop Location: 534264-534333 bp Feature: domain Description: Reg_prop Location: 5342 64-534333 bp Feature: domain Description: COG3292 Location: 534447-534780 bp Feature: domain Description: COG32 92 Location: 534447-534780 bp Feature: domain Description: Reg_prop Location: 534837-534903 bp Feature: domain Description: Reg_prop Location: 534837-534903 bp Feature: domain Description: Y_Y_Y Location: 535236-535377 bp Feature: domain Description: Y_Y_Y Location: 5352 36-535377 bp Feature: domain Description: HTH_ARAC Location: 535761-536010 bp Feature: domain Description: HTH_ARAC Location: 535761-536010 bp Feature: gene Location: 536274-537638 bp Feature: domain Description: tig Location: 536316-537543 bp Feature: domain Description: tig Location: 536316-537543 bp Feature: gene Location: 538039-539445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 538381-538999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 538381-538999 bp Feature: domain Description: GIIM Note: maturase Location: 539053-539257 bp Feature: domain Description: GIIM Note: maturase Location: 539053-5392 57 bp Feature: gene Location: 539956-540975 bp Feature: domain Description: PRK12879 Location: 539968-540940 bp Feature: domain Description: PRK12 879 Location: 539968-540940 bp Feature: gene Location: 540990-541175 bp Feature: domain Description: rpmF Location: 540993-541155 bp Feature: domain Description: rpmF Location: 540993-541155 bp Feature: gene Location: 584964-585875 bp Feature: domain Description: YafY Location: 584982-585849 bp Feature: domain Description: YafY Location: 584982 -585849 bp Feature: gene Location: 585892-586875 bp Feature: domain Description: Glyco_transf_90 Location: 586351-586795 bp Feature: domain Description: Glyco_transf_90 Location: 586351-586795 bp Feature: gene Location: 587061-588467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 587403-588021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 587403-58802 1 bp Feature: domain Description: GIIM Note: maturase Location: 588075-588279 bp Feature: domain Description: GIIM Note: maturase Location: 588075-5882 79 bp Feature: gene Location: 588980-593308 bp Feature: domain Description: PRK00566 Location: 589004-593279 bp Feature: domain Description: PRK00566 Location: 589004-5932 79 bp Feature: gene Location: 593337-597149 bp Feature: domain Description: rpoB Location: 593361-597144 bp Feature: domain Description: rpoB Location: 593361-597144 bp Feature: gene Location: 933490-934086 bp Feature: domain Description: Cyclophil_like2 Location: 933607-933940 bp Feature: domain Description: Cyclophil_like2 Location: 933607-933940 bp Feature: gene Location: 934091-935020 bp Feature: domain Description: FrsA Location: 934202-935015 bp Feature: domain Description: FrsA Location: 9342 02 -935015 bp Feature: gene Location: 935443-936849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 935785-936403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 935785-936403 bp Feature: domain Description: GIIM Note: maturase Location: 936457-936661 bp Feature: domain Description: GIIM Note: maturase Location: 936457-936661 bp Feature: gene Location: 936943-937122 bp Feature: gene Location: 937127-937669 bp Feature: domain Description: WrbA Location: 937136-937463 bp Feature: domain Description: WrbA Location: 937136-937463 bp Feature: gene Location: 1000760-1002073 bp Feature: domain Description: COG1373 Location: 1000769-1001939 bp Feature: domain Description: COG1373 Location: 1000769-1001939 bp Feature: gene Location: 1002300-1003607 bp Feature: domain Description: pbuX Location: 1002372-1003587 bp Feature: domain Description: pbuX Location: 1002 372 -1003587 bp Feature: gene Location: 1004117-1005523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1004459-1005077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1004459-1005077 bp Feature: domain Description: GIIM Note: maturase Location: 1005131-1005335 bp Feature: domain Description: GIIM Note: maturase Location: 1005131-1005335 bp Feature: gene Location: 1006038-1007444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1006380-1006998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1006380-1006998 bp Feature: domain Description: GIIM Note: maturase Location: 1007052-1007256 bp Feature: domain Description: GIIM Note: maturase Location: 1007052 -10072 56 bp Feature: gene Location: 1007567-1011136 bp Feature: domain Description: F5_F8_type_C Location: 1008287-1008527 bp Feature: domain Description: F5_F8_type_C Location: 10082 87-100852 7 bp Feature: domain Description: LacZ Location: 1008842-1010018 bp Feature: domain Description: LacZ Location: 1008842 -1010018 bp Feature: domain Description: Ig_GlcNase Location: 1010804-1011116 bp Feature: domain Description: Ig_GlcNase Location: 1010804-1011116 bp Feature: gene Location: 1011340-1013001 bp Feature: domain Description: PRK03818 Location: 1011376-1012999 bp Feature: domain Description: PRK03818 Location: 1011376-1012 999 bp Feature: gene Location: 1373054-1373764 bp Feature: domain Description: AAK_UMPK-PyrH-Ec Location: 1373069-1373759 bp Feature: domain Description: AAK_UMPK-PyrH-Ec Location: 1373069-1373759 bp Feature: gene Location: 1373782-1374840 bp Feature: domain Description: Endonuclease_1 Location: 1373959-1374610 bp Feature: domain Description: Endonuclease_1 Location: 1373959-1374610 bp Feature: gene Location: 1375325-1376731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1375667-1376285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1375667-13762 85 bp Feature: domain Description: GIIM Note: maturase Location: 1376339-1376543 bp Feature: domain Description: GIIM Note: maturase Location: 1376339-1376543 bp Feature: gene Location: 1376837-1377262 bp Feature: domain Description: FMN_bind Location: 1376999-1377239 bp Feature: domain Description: FMN_bind Location: 1376999-13772 39 bp Feature: gene Location: 1377285-1380113 bp Feature: domain Description: PqqL Location: 1377348-1378701 bp Feature: domain Description: PqqL Location: 1377348-1378701 bp Feature: domain Description: PqqL Location: 1379157-1380108 bp Feature: domain Description: PqqL Location: 1379157-1380108 bp Feature: gene Location: 1442769-1443710 bp Feature: gene Location: 1443753-1444874 bp Feature: domain Description: DUF5017 Location: 1444095-1444383 bp Feature: domain Description: DUF5017 Location: 1444095-1444383 bp Feature: gene Location: 1445361-1446767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1445703-1446321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1445703-144632 1 bp Feature: domain Description: GIIM Note: maturase Location: 1446375-1446579 bp Feature: domain Description: GIIM Note: maturase Location: 1446375-1446579 bp Feature: gene Location: 1447100-1448566 bp Feature: domain Description: AAA-ATPase_like Location: 1447130-1447958 bp Feature: domain Description: AAA-ATPase_like Location: 1447130-1447958 bp Feature: domain Description: PDDEXK_9 Location: 1448387-1448555 bp Feature: domain Description: PDDEXK_9 Location: 1448387-1448555 bp Feature: gene Location: 1448711-1448929 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MTAN (cd09008), LuxS (pfam02664), RVT-GII, GIIM (pfam08388), CTP_transf_1 (pfam01148), HflB (COG0465), RVT-DGRs, HTH_MlrA-like_sg2 (cd04765), LRR_3 (sd00036), Glyco_hydro_20b (pfam02838)
GH20_chitobiase-like (cd06563), P-type_ATPase-Cd_Zn_Co_like (cd07548), KOG2233 (KOG2233, Alpha-N-acetylglucosaminidase ), COG3292 (Periplasmic ligand-binding sensor domain ), Reg_prop (pfam07494), Y_Y_Y (pfam07495), HTH_ARAC (smart00342), tig (TIGR00115), PRK12879 (3-oxoacyl-(acyl carrier protein) synthase III; Reviewed), rpmF (PRK12286)
YafY (COG2378), Glyco_transf_90 (pfam05686), PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), rpoB (TIGR02013), Cyclophil_like2 (pfam18050), FrsA (COG1073), WrbA (COG0655), COG1373 (Predicted ATPase, AAA+ superfamily ), pbuX (TIGR03173), F5_F8_type_C (pfam00754)
LacZ (COG3250), Ig_GlcNase (pfam18368), PRK03818 (putative transporter; Validated), AAK_UMPK-PyrH-Ec (cd04254), Endonuclease_1 (pfam04231), FMN_bind (smart00900), PqqL (COG0612), DUF5017 (pfam16409), AAA-ATPase_like (pfam09820), PDDEXK_9 (pfam08011)

Seq: LT985343.1 (1532 bp)
Overview 1 RT 1: 103-1341 bp Neighborhood of RT #1 [103, 1352] group_II_RT_mat RVT-GII Feature: gene Location: 103-252 bp Feature: gene Location: 615-1082 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 621-882 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 621-882 bp Feature: gene Location: 1086-1352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1092-1341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1092-13 41 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII

Seq: LT985324.1 (1352076 bp)
Overview 1 RT 1: 10458-17591 bp 2 RT 2: 67937-72895 bp 3 RT 3: 219451-226577 bp 4 RT 4: 454991-459916 bp 5 RT 5: 482229-489256 bp 6 RT 6: 598902-605937 bp Neighborhood of RT #1 [10458, 17626] groEL groES RVT-GII GIIM HTH_LUXR Neighborhood of RT #2 [67937, 73401] RVT-GII GIIM DUF772 DDE_Tnp_1 VirE_N Neighborhood of RT #3 [219451, 226579] KOG1372 GDP_FS_SDR_e RVT-GII GIIM PRK14031 PRK14032 Neighborhood of RT #4 [454991, 459916] PIN_VapC4-5_FitB-like RVT-Retrons REC Neighborhood of RT #5 [482229, 489267] DUF772 DDE_Tnp_1 RVT-GII group_II_RT_mat secA Neighborhood of RT #6 [598902, 605937] engB PFL1 RVT-GII GIIM PRK11819 Feature: gene Location: 10458-12089 bp Feature: domain Description: groEL Location: 10461-12084 bp Feature: domain Description: groEL Location: 104 61-12084 bp Feature: gene Location: 12126-12398 bp Feature: domain Description: groES Location: 12129-12393 bp Feature: domain Description: groES Location: 12129-12393 bp Feature: gene Location: 13124-14530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13466-14084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134 66-14 084 bp Feature: domain Description: GIIM Note: maturase Location: 14138-14342 bp Feature: domain Description: GIIM Note: maturase Location: 14 138-14 34 2 bp Feature: gene Location: 14638-17388 bp Feature: gene Location: 17414-17626 bp Feature: domain Description: HTH_LUXR Location: 17438-17591 bp Feature: domain Description: HTH_LUXR Location: 174 38-17591 bp Feature: gene Location: 67937-68071 bp Feature: gene Location: 68238-68720 bp Feature: gene Location: 69194-70600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69536-70154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69536-70154 bp Feature: domain Description: GIIM Note: maturase Location: 70208-70412 bp Feature: domain Description: GIIM Note: maturase Location: 70208-704 12 bp Feature: gene Location: 70785-72233 bp Feature: domain Description: DUF772 Location: 70938-71142 bp Feature: domain Description: DUF772 Location: 70938-7114 2 bp Feature: domain Description: DDE_Tnp_1 Location: 71208-72210 bp Feature: domain Description: DDE_Tnp_1 Location: 71208-72210 bp Feature: gene Location: 72391-73401 bp Feature: domain Description: VirE_N Location: 72544-72895 bp Feature: domain Description: VirE_N Location: 7254 4 -72895 bp Feature: gene Location: 219451-220548 bp Feature: domain Description: KOG1372 Location: 219457-220480 bp Feature: domain Description: KOG1372 Location: 2194 57-2204 80 bp Feature: gene Location: 220621-221829 bp Feature: domain Description: GDP_FS_SDR_e Location: 220642-221812 bp Feature: domain Description: GDP_FS_SDR_e Location: 22064 2-221812 bp Feature: gene Location: 222345-223751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 222687-223305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 222687-223305 bp Feature: domain Description: GIIM Note: maturase Location: 223359-223563 bp Feature: domain Description: GIIM Note: maturase Location: 223359-223563 bp Feature: gene Location: 223858-225192 bp Feature: domain Description: PRK14031 Location: 223861-225190 bp Feature: domain Description: PRK14 031 Location: 223861-225190 bp Feature: gene Location: 225233-226579 bp Feature: domain Description: PRK14032 Location: 225245-226577 bp Feature: domain Description: PRK14 032 Location: 22524 5-226577 bp Feature: gene Location: 454991-455242 bp Feature: gene Location: 455239-455442 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 455254-455431 bp Feature: domain Description: PIN_VapC4 -5_FitB-like Location: 4 55254 -4 554 31 bp Feature: gene Location: 455675-457648 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 455867-456461 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4 55867-4 564 61 bp Feature: gene Location: 457655-459652 bp Feature: domain Description: REC Location: 458888-459134 bp Feature: domain Description: REC Location: 4 58888-4 59134 bp Feature: gene Location: 459782-459916 bp Feature: gene Location: 482229-483374 bp Feature: domain Description: DUF772 Location: 482385-482598 bp Feature: domain Description: DUF772 Location: 4 82385-4 82598 bp Feature: domain Description: DDE_Tnp_1 Location: 482940-483246 bp Feature: domain Description: DDE_Tnp_1 Location: 4 8294 0-4 8324 6 bp Feature: gene Location: 483840-483974 bp Feature: gene Location: 484345-485238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484687-485230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 84 687-4 85230 bp Feature: gene Location: 485266-485751 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 485284-485551 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4 85284 -4 85551 bp Feature: gene Location: 485881-489267 bp Feature: domain Description: secA Location: 485890-489256 bp Feature: domain Description: secA Location: 4 85890-4 89256 bp Feature: gene Location: 598902-599507 bp Feature: domain Description: engB Location: 598905-599487 bp Feature: domain Description: engB Location: 598905-5994 87 bp Feature: gene Location: 599736-601976 bp Feature: domain Description: PFL1 Location: 599760-601962 bp Feature: domain Description: PFL1 Location: 599760-601962 bp Feature: gene Location: 602134-603540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 602476-603094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6024 76-603094 bp Feature: domain Description: GIIM Note: maturase Location: 603148-603352 bp Feature: domain Description: GIIM Note: maturase Location: 60314 8-603352 bp Feature: gene Location: 604027-605724 bp Feature: domain Description: PRK11819 Location: 604048-605713 bp Feature: domain Description: PRK11819 Location: 604 04 8-605713 bp Feature: gene Location: 605779-605937 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groEL (PRK12852), groES (PRK14533), RVT-GII, GIIM (pfam08388), HTH_LUXR (smart00421), DUF772 (pfam05598), DDE_Tnp_1 (pfam01609), VirE_N (pfam08800), KOG1372 (KOG1372, GDP-mannose 4,6 dehydratase ), GDP_FS_SDR_e (cd05239)
PRK14031 (NADP-specific glutamate dehydrogenase), PRK14032 (citrate synthase; Provisional), PIN_VapC4-5_FitB-like (cd18754), RVT-Retrons, REC (smart00448), group_II_RT_mat (TIGR04416), secA (TIGR00963), engB (PRK00454), PFL1 (cd01678), PRK11819 (putative ABC transporter ATP-binding protein; Reviewed)

Seq: LT985327.1 (61873 bp)
Overview 1 RT 1: 17636-20095 bp 2 RT 2: 24929-29110 bp Neighborhood of RT #1 [17636, 20095] DMRL_synthase GIIM RVT-GII Neighborhood of RT #2 [24929, 29136] Mob_Pre RVT-GII ispH DUF1573 DUF1573 DUF1573 Feature: gene Location: 17636-18112 bp Feature: domain Description: DMRL_synthase Location: 17702-18107 bp Feature: domain Description: DMRL_synthase Location: 17702-18107 bp Feature: gene Location: 18218-18607 bp Feature: domain Description: GIIM Note: maturase Location: 18221-18425 bp Feature: domain Description: GIIM Note: maturase Location: 18221-18425 bp Feature: gene Location: 18638-18955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18644-18929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18644-18929 bp Feature: gene Location: 19286-19480 bp Feature: gene Location: 19484-20095 bp Feature: gene Location: 24929-25621 bp Feature: domain Description: Mob_Pre Location: 24947-25427 bp Feature: domain Description: Mob_Pre Location: 24947-25 427 bp Feature: gene Location: 25821-26087 bp Feature: gene Location: 26146-26577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26488-26554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26488-265 5 4 bp Feature: gene Location: 27177-28043 bp Feature: domain Description: ispH Location: 27195-28035 bp Feature: domain Description: ispH Location: 27195 -28035 bp Feature: gene Location: 28075-29136 bp Feature: domain Description: DUF1573 Location: 28150-28429 bp Feature: domain Description: DUF15 73 Location: 2815 0-28429 bp Feature: domain Description: DUF1573 Location: 28498-28690 bp Feature: domain Description: DUF15 73 Location: 28498-28690 bp Feature: domain Description: DUF1573 Location: 28843-29110 bp Feature: domain Description: DUF15 73 Location: 28843-29110 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DMRL_synthase (pfam00885), GIIM (pfam08388), RVT-GII, Mob_Pre (pfam01076), ispH (PRK01045), DUF1573 (pfam07610)

Seq: LT985326.1 (361112 bp)
Overview 1 RT 1: 257282-261740 bp 2 RT 2: 340186-346697 bp Neighborhood of RT #1 [257282, 261740] DUF4995 Glyco_hydro_88 RVT-GII GH97_N Glyco_hydro_97 GH97_C Neighborhood of RT #2 [340186, 346697] LPG_synthase_TM EcCorA_ZntB-like_u2 RVT-GII GIIM DUF349 DUF349 DUF349 DUF349 DUF349 DUF349 Feature: gene Location: 257282-257713 bp Feature: gene Location: 257679-259043 bp Feature: domain Description: DUF4995 Location: 257799-258003 bp Feature: domain Description: DUF4995 Location: 257799-258003 bp Feature: domain Description: Glyco_hydro_88 Location: 258051-259026 bp Feature: domain Description: Glyco_hydro_88 Location: 258051-259026 bp Feature: gene Location: 259127-259456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259166-259385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25916 6 -259385 bp Feature: gene Location: 259491-261464 bp Feature: domain Description: GH97_N Location: 259575-260367 bp Feature: domain Description: GH97_N Location: 259575-26 036 7 bp Feature: domain Description: Glyco_hydro_97 Location: 260394-261168 bp Feature: domain Description: Glyco_hydro_97 Location: 26 0394-26 116 8 bp Feature: domain Description: GH97_C Location: 261174-261450 bp Feature: domain Description: GH97_C Location: 26 1174-26 1450 bp Feature: gene Location: 261522-261740 bp Feature: gene Location: 340186-341181 bp Feature: domain Description: LPG_synthase_TM Location: 340231-341131 bp Feature: domain Description: LPG_synthase_TM Location: 340231-341131 bp Feature: gene Location: 341698-342624 bp Feature: domain Description: EcCorA_ZntB-like_u2 Location: 341764-342619 bp Feature: domain Description: EcCorA_ZntB-like_u2 Location: 34176 4-3426 19 bp Feature: gene Location: 342727-344133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 343069-343687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34306 9-3436 87 bp Feature: domain Description: GIIM Note: maturase Location: 343741-343945 bp Feature: domain Description: GIIM Note: maturase Location: 343741-343945 bp Feature: gene Location: 344741-346546 bp Feature: domain Description: DUF349 Location: 344804-344924 bp Feature: domain Description: DUF349 Location: 344804-344924 bp Feature: domain Description: DUF349 Location: 345050-345260 bp Feature: domain Description: DUF349 Location: 345050-34526 0 bp Feature: domain Description: DUF349 Location: 345275-345491 bp Feature: domain Description: DUF349 Location: 345275-345491 bp Feature: domain Description: DUF349 Location: 345506-345740 bp Feature: domain Description: DUF349 Location: 345506 -345740 bp Feature: domain Description: DUF349 Location: 345755-345971 bp Feature: domain Description: DUF349 Location: 345755-345971 bp Feature: domain Description: DUF349 Location: 345983-346199 bp Feature: domain Description: DUF349 Location: 345983-346 199 bp Feature: gene Location: 346557-346697 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4995 (pfam16386), Glyco_hydro_88 (pfam07470), RVT-GII, GH97_N (pfam14508), Glyco_hydro_97 (pfam10566), GH97_C (pfam14509), LPG_synthase_TM (pfam03706), EcCorA_ZntB-like_u2 (cd12827), GIIM (pfam08388), DUF349 (pfam03993)