myRT

myRT report for GCA_900290315.1_SbA3

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Seq: OKRF01000481.1 Solibacteraceae bacterium SbA3 strain Peat soil MAG SbA3 genome assembly, contig: SBA3_Contig_55, whole genome shotgun sequence (33230 bp)
Overview 1 RT 1: 27426-29927 bp Neighborhood of RT #1 [27426, 29927] RVT-GII Feature: gene Location: 27426-27791 bp Feature: gene Location: 27919-28485 bp Feature: gene Location: 28711-28986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28738-28963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28738-28963 bp Feature: gene Location: 29236-29454 bp Feature: gene Location: 29598-29927 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: OKRF01000457.1 Solibacteraceae bacterium SbA3 strain Peat soil MAG SbA3 genome assembly, contig: SBA3_Contig_51, whole genome shotgun sequence (31847 bp)
Overview 1 RT 1: 14256-17956 bp Neighborhood of RT #1 [14256, 17973] COG5304 RVT-UG7 PRK09319 Feature: gene Location: 14256-14597 bp Feature: domain Description: COG5304 Location: 14445-14577 bp Feature: domain Description: COG5304 Location: 14445-14577 bp Feature: gene Location: 14482-14958 bp Feature: gene Location: 15168-15899 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 15606-15870 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 15606-15870 bp Feature: gene Location: 15928-16578 bp Feature: gene Location: 16831-17973 bp Feature: domain Description: PRK09319 Location: 16837-17956 bp Feature: domain Description: PRK09319 Location: 16837-17956 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5304 (Predicted DNA binding protein, CopG/RHH family ), RVT-UG7, PRK09319 (bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase RibB/GTP cyclohydrolase II RibA)

Seq: OKRF01000527.1 Solibacteraceae bacterium SbA3 strain Peat soil MAG SbA3 genome assembly, contig: SBA3_Contig_97, whole genome shotgun sequence (15468 bp)
Overview 1 RT 1: 1-2112 bp Neighborhood of RT #1 [1, 2114] RVT-GII mmdA Feature: gene Location: 1-183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-124 bp Feature: gene Location: 363-497 bp Feature: gene Location: 570-2114 bp Feature: domain Description: mmdA Location: 597-2112 bp Feature: domain Description: mmdA Location: 597-2112 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, mmdA (TIGR01117)

Seq: OKRF01000035.1 Solibacteraceae bacterium SbA3 strain Peat soil MAG SbA3 genome assembly, contig: SBA3_Contig_13, whole genome shotgun sequence (15722 bp)
Overview 1 RT 1: 2299-8459 bp Neighborhood of RT #1 [2299, 8803] RVT-UG4 STKc_PknB_like TolB TolB TolB Feature: gene Location: 2299-2562 bp Feature: gene Location: 2608-3018 bp Feature: gene Location: 2645-3934 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3227-3677 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3227-3677 bp Feature: gene Location: 4823-5959 bp Feature: gene Location: 6008-8803 bp Feature: domain Description: STKc_PknB_like Location: 6197-6950 bp Feature: domain Description: STKc_PknB_like Location: 6197-6950 bp Feature: domain Description: TolB Location: 7124-7667 bp Feature: domain Description: TolB Location: 7124 -7667 bp Feature: domain Description: TolB Location: 8033-8174 bp Feature: domain Description: TolB Location: 8033-8174 bp Feature: domain Description: TolB Location: 8192-8459 bp Feature: domain Description: TolB Location: 8192-84 59 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, STKc_PknB_like (cd14014), TolB (COG0823)

Seq: OKRF01000009.1 Solibacteraceae bacterium SbA3 strain Peat soil MAG SbA3 genome assembly, contig: SBA3_Contig_106, whole genome shotgun sequence (18788 bp)
Overview 1 RT 1: 3715-7554 bp Neighborhood of RT #1 [3715, 7554] acidobact_VWFA RVT-GII Feature: gene Location: 3715-5595 bp Feature: domain Description: acidobact_VWFA Location: 4801-5587 bp Feature: domain Description: acidobact_VWFA Location: 4801-5 5 87 bp Feature: gene Location: 5746-6117 bp Feature: gene Location: 6486-6857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6489-6702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6489-6702 bp Feature: gene Location: 6924-7064 bp Feature: gene Location: 7177-7554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT acidobact_VWFA (TIGR03436), RVT-GII

Seq: OKRF01000123.1 Solibacteraceae bacterium SbA3 strain Peat soil MAG SbA3 genome assembly, contig: SBA3_Contig_209, whole genome shotgun sequence (12191 bp)
Overview 1 RT 1: 1-6758 bp Neighborhood of RT #1 [1, 6758] Reg_prop Reg_prop Reg_prop Reg_prop Reg_prop Y_Y_Y TMAO_torS RVT-GII GIIM CytoC_RC CytoC_RC Feature: gene Location: 1-198 bp Feature: gene Location: 579-4148 bp Feature: domain Description: Reg_prop Location: 1113-1176 bp Feature: domain Description: Reg_prop Location: 1113-1176 bp Feature: domain Description: Reg_prop Location: 1233-1299 bp Feature: domain Description: Reg_prop Location: 1233-1299 bp Feature: domain Description: Reg_prop Location: 1494-1551 bp Feature: domain Description: Reg_prop Location: 1494-1551 bp Feature: domain Description: Reg_prop Location: 1623-1686 bp Feature: domain Description: Reg_prop Location: 16 23-16 86 bp Feature: domain Description: Reg_prop Location: 1881-1932 bp Feature: domain Description: Reg_prop Location: 1881-1932 bp Feature: domain Description: Y_Y_Y Location: 2649-2805 bp Feature: domain Description: Y_Y_Y Location: 26 49-2805 bp Feature: domain Description: TMAO_torS Location: 2922-4134 bp Feature: domain Description: TMAO_torS Location: 2922-4134 bp Feature: gene Location: 4167-4865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4170-4251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4170-4251 bp Feature: domain Description: GIIM Note: maturase Location: 4416-4560 bp Feature: domain Description: GIIM Note: maturase Location: 4416 -456 0 bp Feature: gene Location: 5102-5746 bp Feature: domain Description: CytoC_RC Location: 5204-5381 bp Feature: domain Description: CytoC_RC Location: 5204-5381 bp Feature: domain Description: CytoC_RC Location: 5417-5729 bp Feature: domain Description: CytoC_RC Location: 5417-5729 bp Feature: gene Location: 5886-6758 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Reg_prop (pfam07494), Y_Y_Y (pfam07495), TMAO_torS (TIGR02956), RVT-GII, GIIM (pfam08388), CytoC_RC (pfam02276)

Seq: OKRF01000089.1 Solibacteraceae bacterium SbA3 strain Peat soil MAG SbA3 genome assembly, contig: SBA3_Contig_179, whole genome shotgun sequence (18687 bp)
Overview 1 RT 1: 16685-18564 bp Neighborhood of RT #1 [16685, 18686] LytT RVT-GII Feature: gene Location: 16685-17473 bp Feature: domain Description: LytT Location: 16700-17465 bp Feature: domain Description: LytT Location: 167 00-17 465 bp Feature: gene Location: 17767-18051 bp Feature: gene Location: 18111-18686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18255-18564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18255-18564 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LytT (COG3279), RVT-GII

Seq: OKRF01000088.1 Solibacteraceae bacterium SbA3 strain Peat soil MAG SbA3 genome assembly, contig: SBA3_Contig_178, whole genome shotgun sequence (12952 bp)
Overview 1 RT 1: 122-4280 bp Neighborhood of RT #1 [122, 4303] RVT-GII STKc_PknB_like TolBN TPR TPR FixB Feature: gene Location: 122-436 bp Feature: gene Location: 527-862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 635-710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 635-710 bp Feature: gene Location: 878-3097 bp Feature: domain Description: STKc_PknB_like Location: 914-1703 bp Feature: domain Description: STKc_PknB_like Location: 914-1703 bp Feature: domain Description: TolBN Location: 1712-2120 bp Feature: domain Description: TolBN Location: 1712-2120 bp Feature: domain Description: TPR Location: 2192-2477 bp Feature: domain Description: TPR Location: 2192-2477 bp Feature: domain Description: TPR Location: 2543-2780 bp Feature: domain Description: TPR Location: 2543-278 0 bp Feature: gene Location: 3284-4303 bp Feature: domain Description: FixB Location: 3296-4280 bp Feature: domain Description: FixB Location: 3296-428 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, STKc_PknB_like (cd14014), TolBN (COG5616), TPR (smart00028), FixB (COG2025)

Seq: OKRF01000327.1 Solibacteraceae bacterium SbA3 strain Peat soil MAG SbA3 genome assembly, contig: SBA3_Contig_393, whole genome shotgun sequence (8297 bp)
Overview 1 RT 1: 34-1237 bp Neighborhood of RT #1 [34, 1254] RVT-DGRs Avd_like Feature: gene Location: 34-699 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 43-676 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 43-676 bp Feature: gene Location: 692-940 bp Feature: gene Location: 910-1254 bp Feature: domain Description: Avd_like Location: 931-1237 bp Feature: domain Description: Avd_like Location: 9 31-1237 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376)

Seq: OKRF01000020.1 Solibacteraceae bacterium SbA3 strain Peat soil MAG SbA3 genome assembly, contig: SBA3_Contig_116, whole genome shotgun sequence (16012 bp)
Overview 1 RT 1: 47-2064 bp Neighborhood of RT #1 [47, 2064] RVT-GII AP_endonuc_2 Feature: gene Location: 47-385 bp Feature: gene Location: 594-728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 600-672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 600-672 bp Feature: gene Location: 1067-1705 bp Feature: domain Description: AP_endonuc_2 Location: 1124-1481 bp Feature: domain Description: AP_endonuc_2 Location: 1124-1481 bp Feature: gene Location: 1780-2064 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, AP_endonuc_2 (pfam01261)