myRT

myRT report for GCA_900290375.1_SbF1

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Seq: OMOF01000554.1 (3856 bp)
Overview 1 RT 1: 2245-3851 bp Neighborhood of RT #1 [2245, 3853] RVT-GII Feature: gene Location: 2245-2415 bp Feature: gene Location: 2443-2922 bp Feature: gene Location: 3212-3853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3416-3851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 341 6-3851 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: OMOF01000464.1 (3036 bp)
Overview 1 RT 1: 129-1833 bp Neighborhood of RT #1 [129, 1943] RVT-GII HNHc Feature: gene Location: 129-1943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 438-1143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 438-1143 bp Feature: domain Description: HNHc Note: nucleases Location: 1665-1833 bp Feature: domain Description: HNHc Note: nucleases Location: 1665-1833 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: OMOF01000152.1 (7204 bp)
Overview 1 RT 1: 5246-7070 bp Neighborhood of RT #1 [5246, 7153] RVT-GII GIIM Feature: gene Location: 5246-5641 bp Feature: gene Location: 5843-6421 bp Feature: gene Location: 6593-7153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6599-6767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6599-6767 bp Feature: domain Description: GIIM Note: maturase Location: 6848-7070 bp Feature: domain Description: GIIM Note: maturase Location: 6848-7070 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: OMOF01000679.1 (1296 bp)
Overview 1 RT 1: 336-1239 bp Neighborhood of RT #1 [336, 1295] RVT-GII Feature: gene Location: 336-482 bp Feature: gene Location: 549-1295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 753-1239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 753-1239 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: OMOF01000394.1 (1721 bp)
Overview 1 RT 1: 3-1513 bp Neighborhood of RT #1 [3, 1620] RVT-GII GIIM RVT-GII HNHc Feature: gene Location: 3-563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-177 bp Feature: domain Description: GIIM Note: maturase Location: 258-477 bp Feature: domain Description: GIIM Note: maturase Location: 25 8-477 bp Feature: gene Location: 616-1620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 640-790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 640-790 bp Feature: domain Description: HNHc Note: nucleases Location: 1345-1513 bp Feature: domain Description: HNHc Note: nucleases Location: 1345 -15 13 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: OMOF01000062.1 (5552 bp)
Overview 1 RT 1: 1-1603 bp Neighborhood of RT #1 [1, 1614] RVT-GII PRK05803 Feature: gene Location: 1-789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259-739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259-739 bp Feature: gene Location: 963-1142 bp Feature: gene Location: 1324-1614 bp Feature: domain Description: PRK05803 Location: 1327-1603 bp Feature: domain Description: PRK05803 Location: 1327-16 03 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK05803 (RNA polymerase sporulation sigma factor SigK)

Seq: OMOF01000533.1 (2979 bp)
Overview 1 RT 1: 165-2855 bp Neighborhood of RT #1 [165, 2855] RVT-GII GIIM COG5421 Feature: gene Location: 165-1505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 450-1143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 450-1143 bp Feature: domain Description: GIIM Note: maturase Location: 1209-1416 bp Feature: domain Description: GIIM Note: maturase Location: 1209-1416 bp Feature: gene Location: 2225-2629 bp Feature: domain Description: COG5421 Location: 2258-2567 bp Feature: domain Description: COG5421 Location: 2258-2567 bp Feature: gene Location: 2688-2855 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG5421 (Transposase )

Seq: OMOF01000265.1 (1998 bp)
Overview 1 RT 1: 88-1995 bp Neighborhood of RT #1 [88, 1995] RVT-GII GIIM Feature: gene Location: 88-297 bp Feature: gene Location: 485-1831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 791-1460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 791-1460 bp Feature: domain Description: GIIM Note: maturase Location: 1550-1733 bp Feature: domain Description: GIIM Note: maturase Location: 1550-1733 bp Feature: gene Location: 1831-1995 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: OMOF01000086.1 (6802 bp)
Overview 1 RT 1: 5622-6729 bp Neighborhood of RT #1 [5622, 6800] DDE_Tnp_1 KOG4768 RVT-GII Feature: gene Location: 5622-5915 bp Feature: domain Description: DDE_Tnp_1 Location: 5628-5847 bp Feature: domain Description: DDE_Tnp_1 Location: 5628-5847 bp Feature: gene Location: 6355-6534 bp Feature: domain Description: KOG4768 Location: 6358-6508 bp Feature: domain Description: KOG4768 Location: 6358-6508 bp Feature: gene Location: 6579-6800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6600-6729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6600-6729 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RVT-GII

Seq: OMOF01000412.1 (53012 bp)
Overview 1 RT 1: 3-1639 bp Neighborhood of RT #1 [3, 1683] KOG4768 RVT-GII retinol-DH_like_SDR_c_like Feature: gene Location: 3-236 bp Feature: domain Description: KOG4768 Location: 6-237 bp Feature: domain Description: KOG4768 Location: 6-237 bp Feature: gene Location: 376-921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 646-898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 646-898 bp Feature: gene Location: 983-1132 bp Feature: gene Location: 1294-1683 bp Feature: domain Description: retinol-DH_like_SDR_c_like Location: 1297-1639 bp Feature: domain Description: retinol-DH_like_SDR_c_like Location: 1297-1639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RVT-GII, retinol-DH_like_SDR_c_like (cd05327)

Seq: OMOF01000182.1 (9756 bp)
Overview 1 RT 1: 1898-9706 bp Neighborhood of RT #1 [1898, 9706] RVT-GII Intron_maturas2 RVT-GII GIIM Feature: gene Location: 1898-2524 bp Feature: gene Location: 2568-2918 bp Feature: gene Location: 3603-5378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3876-4668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3876-4668 bp Feature: domain Description: Intron_maturas2 Location: 4752-5052 bp Feature: domain Description: Intron_maturas2 Location: 4752-5052 bp Feature: gene Location: 6159-6656 bp Feature: gene Location: 7189-7575 bp Feature: gene Location: 7828-9135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8077-8767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8077-8767 bp Feature: domain Description: GIIM Note: maturase Location: 8863-9055 bp Feature: domain Description: GIIM Note: maturase Location: 8863-9055 bp Feature: gene Location: 9467-9706 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), GIIM (pfam08388)

Seq: OMOF01000690.1 (1895 bp)
Overview 1 RT 1: 93-1892 bp Neighborhood of RT #1 [93, 1892] RVT-GII GIIM Feature: gene Location: 93-1340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 297-954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 297-954 bp Feature: domain Description: GIIM Note: maturase Location: 1035-1254 bp Feature: domain Description: GIIM Note: maturase Location: 1035-12 54 bp Feature: gene Location: 1749-1892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: OMOF01000942.1 (1115 bp)
Overview 1 RT 1: 3-774 bp Neighborhood of RT #1 [3, 1112] RVT-UG25 Feature: gene Location: 3-1112 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 294-774 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 294-774 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG25

Seq: OMOF01000504.1 (1698 bp)
Overview 1 RT 1: 1-1639 bp Neighborhood of RT #1 [1, 1680] RVT-GII Feature: gene Location: 1-324 bp Feature: gene Location: 361-549 bp Feature: gene Location: 763-1680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1081-1639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1081-1639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: OMOF01000328.1 (10428 bp)
Overview 1 RT 1: 118-1439 bp Neighborhood of RT #1 [118, 1453] RVT-GII PhdYeFM_antitox ParE_toxin Feature: gene Location: 118-504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 160-496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 160-496 bp Feature: gene Location: 853-1155 bp Feature: domain Description: PhdYeFM_antitox Location: 901-1093 bp Feature: domain Description: PhdYeFM_antitox Location: 901-1093 bp Feature: gene Location: 1196-1453 bp Feature: domain Description: ParE_toxin Location: 1208-1439 bp Feature: domain Description: ParE_toxin Location: 1208-1439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PhdYeFM_antitox (pfam02604), ParE_toxin (pfam05016)

Seq: OMOF01000422.1 (2534 bp)
Overview 1 RT 1: 3-2325 bp Neighborhood of RT #1 [3, 2429] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 3-161 bp Feature: gene Location: 657-2429 bp Feature: domain Description: RVT_N Location: 705-948 bp Feature: domain Description: RVT_N Location: 705-948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1005-1665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1005-16 65 bp Feature: domain Description: GIIM Note: maturase Location: 1728-1962 bp Feature: domain Description: GIIM Note: maturase Location: 1728-1962 bp Feature: domain Description: HNHc Note: nucleases Location: 2163-2325 bp Feature: domain Description: HNHc Note: nucleases Location: 216 3-2325 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)