myRT

myRT report for GCA_900291465.1_PRJEB24949

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Seq: LT985808.1 (3706277 bp)
Overview 1 RT 1: 581268-589279 bp 2 RT 2: 895935-904859 bp 3 RT 3: 1250142-1256233 bp 4 RT 4: 1386601-1391657 bp 5 RT 5: 1405705-1413588 bp 6 RT 6: 1701857-1708391 bp 7 RT 7: 1782133-1789666 bp 8 RT 8: 1901099-1909463 bp 9 RT 9: 1930711-1936125 bp 10 RT 10: 2831576-2839082 bp 11 RT 11: 2857205-2865874 bp 12 RT 12: 3395790-3401651 bp 13 RT 13: 3643916-3656357 bp Neighborhood of RT #1 [581268, 589279] leuS RVT-GII GIIM DUF3826 Neighborhood of RT #2 [895935, 904859] OMP_RagA_SusC SusD RVT-GII GIIM PRK05286 Neighborhood of RT #3 [1250142, 1256517] rpsB tsf RVT-GII GIIM OmpA_C-like DUF3575 DUF5119 Neighborhood of RT #4 [1386601, 1391657] UshA Fer4 Fer4 RVT-GII GIIM KdgK Neighborhood of RT #5 [1405705, 1413596] DUF5118 DUF5117 ZnMc_MMP_like_2 DUF4953 RVT-GII GIIM lysS DUF4332 Neighborhood of RT #6 [1701857, 1708391] COG3666 DDE_Tnp_1_6 RVT-GII GIIM Calx-beta Neighborhood of RT #7 [1782133, 1789698] groES groEL RVT-GII GIIM HemN PRK12740 Neighborhood of RT #8 [1901099, 1909657] chaperone_ClpB RVT-GII GIIM CirA AcrR Neighborhood of RT #9 [1930711, 1936130] RutF AcrR RVT-GII GIIM PRK07565 Neighborhood of RT #10 [2831576, 2839084] COG3666 DDE_Tnp_1_6 RVT-GII GIIM Virulence_RhuM dnaK Neighborhood of RT #11 [2857205, 2865978] DUF5118 DUF5117 ZnMc_MMP_like_2 DUF4953 DUF5118 DUF5117 ZnMc_MMP_like_2 DUF4953 RVT-GII GIIM Mfa_like_1 HTH_11 Neighborhood of RT #12 [3395790, 3401833] GAF RVT-GII GIIM RsfS HflB Neighborhood of RT #13 [3643916, 3656365] COG3292 COG3292 BaeS PRK11107 YesN COG5421 COG5421 RVT-GII GIIM SusD OMP_RagA_SusC Feature: gene Location: 581268-584105 bp Feature: domain Description: leuS Location: 581271-584100 bp Feature: domain Description: leuS Location: 581 271 -5841 00 bp Feature: gene Location: 584255-584542 bp Feature: gene Location: 585210-586604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585540-586158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585540-5861 58 bp Feature: domain Description: GIIM Note: maturase Location: 586209-586443 bp Feature: domain Description: GIIM Note: maturase Location: 586209-586443 bp Feature: gene Location: 586842-587519 bp Feature: domain Description: DUF3826 Location: 586956-587502 bp Feature: domain Description: DUF3826 Location: 586956-587502 bp Feature: gene Location: 587531-589279 bp Feature: gene Location: 895935-899201 bp Feature: domain Description: OMP_RagA_SusC Location: 896055-899196 bp Feature: domain Description: OMP_RagA_SusC Location: 896055-8991 96 bp Feature: gene Location: 899213-901000 bp Feature: domain Description: SusD Location: 899411-900683 bp Feature: domain Description: SusD Location: 89941 1 -900683 bp Feature: gene Location: 901491-902897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 901833-902451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 901 833-902451 bp Feature: domain Description: GIIM Note: maturase Location: 902505-902709 bp Feature: domain Description: GIIM Note: maturase Location: 902505-902709 bp Feature: gene Location: 903010-904020 bp Feature: domain Description: PRK05286 Location: 903019-903994 bp Feature: domain Description: PRK05286 Location: 90301 9-903994 bp Feature: gene Location: 904110-904859 bp Feature: gene Location: 1250142-1250972 bp Feature: domain Description: rpsB Location: 1250145-1250895 bp Feature: domain Description: rpsB Location: 1 2501 45-1 250895 bp Feature: gene Location: 1251134-1251964 bp Feature: domain Description: tsf Location: 1251137-1251959 bp Feature: domain Description: tsf Location: 1 251 1 37-1 251 959 bp Feature: gene Location: 1252461-1253867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1252803-1253421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 252803-1 253421 bp Feature: domain Description: GIIM Note: maturase Location: 1253475-1253679 bp Feature: domain Description: GIIM Note: maturase Location: 1 253475-1 253679 bp Feature: gene Location: 1254347-1255606 bp Feature: domain Description: OmpA_C-like Location: 1254452-1254713 bp Feature: domain Description: OmpA_C-like Location: 1 254452-1 25471 3 bp Feature: domain Description: DUF3575 Location: 1255076-1255565 bp Feature: domain Description: DUF3575 Location: 1 255076-1 255565 bp Feature: gene Location: 1255603-1256517 bp Feature: domain Description: DUF5119 Location: 1255657-1256233 bp Feature: domain Description: DUF51 1 9 Location: 1 255657-1 256233 bp Feature: gene Location: 1386601-1387470 bp Feature: domain Description: UshA Location: 1386679-1387453 bp Feature: domain Description: UshA Location: 1 386679-1 387453 bp Feature: gene Location: 1387735-1387902 bp Feature: domain Description: Fer4 Location: 1387744-1387810 bp Feature: domain Description: Fer4 Location: 1 387744-1 38781 0 bp Feature: domain Description: Fer4 Location: 1387828-1387894 bp Feature: domain Description: Fer4 Location: 1 387828-1 387894 bp Feature: gene Location: 1388507-1389811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1388747-1389365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 388747-1 389365 bp Feature: domain Description: GIIM Note: maturase Location: 1389419-1389623 bp Feature: domain Description: GIIM Note: maturase Location: 1 38941 9-1 389623 bp Feature: gene Location: 1390068-1391108 bp Feature: domain Description: KdgK Location: 1390080-1391037 bp Feature: domain Description: KdgK Location: 1 390080-1 391 037 bp Feature: gene Location: 1391286-1391657 bp Feature: gene Location: 1405705-1408242 bp Feature: domain Description: DUF5118 Location: 1405852-1405993 bp Feature: domain Description: DUF51 1 8 Location: 1 405852-1 405993 bp Feature: domain Description: DUF5117 Location: 1406020-1406584 bp Feature: domain Description: DUF51 1 7 Location: 1 406020-1 406584 bp Feature: domain Description: ZnMc_MMP_like_2 Location: 1406617-1406983 bp Feature: domain Description: ZnMc_MMP_like_2 Location: 1 40661 7-1 406983 bp Feature: domain Description: DUF4953 Location: 1406986-1407901 bp Feature: domain Description: DUF4953 Location: 1 406986-1 407901 bp Feature: gene Location: 1409481-1409612 bp Feature: gene Location: 1410215-1411621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1410557-1411175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 41 0557-1 41 1 1 75 bp Feature: domain Description: GIIM Note: maturase Location: 1411229-1411433 bp Feature: domain Description: GIIM Note: maturase Location: 1 41 1 229-1 41 1 433 bp Feature: gene Location: 1411705-1411863 bp Feature: gene Location: 1411869-1413596 bp Feature: domain Description: lysS Location: 1411887-1413375 bp Feature: domain Description: lysS Location: 1 41 1 887-1 41 3375 bp Feature: domain Description: DUF4332 Location: 1413414-1413588 bp Feature: domain Description: DUF4332 Location: 1 41 341 4-1 41 3588 bp Feature: gene Location: 1701857-1702843 bp Feature: gene Location: 1703030-1704685 bp Feature: domain Description: COG3666 Location: 1703045-1703513 bp Feature: domain Description: COG3666 Location: 1 703045-1 70351 3 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1704191-1704566 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 1 7041 91 -1 704566 bp Feature: gene Location: 1704864-1706270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1705206-1705824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 705206-1 705824 bp Feature: domain Description: GIIM Note: maturase Location: 1705878-1706082 bp Feature: domain Description: GIIM Note: maturase Location: 1 705878-1 706082 bp Feature: gene Location: 1706897-1708165 bp Feature: domain Description: Calx-beta Location: 1706981-1707239 bp Feature: domain Description: Calx-beta Location: 1 706981 -1 707239 bp Feature: gene Location: 1708173-1708391 bp Feature: gene Location: 1782133-1782405 bp Feature: domain Description: groES Location: 1782136-1782400 bp Feature: domain Description: groES Location: 1 7821 36-1 782400 bp Feature: gene Location: 1782481-1784115 bp Feature: domain Description: groEL Location: 1782484-1784110 bp Feature: domain Description: groEL Location: 1 782484-1 7841 1 0 bp Feature: gene Location: 1784622-1786028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1784964-1785582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 784964-1 785582 bp Feature: domain Description: GIIM Note: maturase Location: 1785636-1785840 bp Feature: domain Description: GIIM Note: maturase Location: 1 785636-1 785840 bp Feature: gene Location: 1786159-1787295 bp Feature: domain Description: HemN Location: 1786168-1787278 bp Feature: domain Description: HemN Location: 1 7861 68-1 787278 bp Feature: gene Location: 1787539-1789698 bp Feature: domain Description: PRK12740 Location: 1787587-1789666 bp Feature: domain Description: PRK1 2740 Location: 1 787587-1 789666 bp Feature: gene Location: 1901099-1901686 bp Feature: gene Location: 1901897-1904485 bp Feature: domain Description: chaperone_ClpB Location: 1901915-1904471 bp Feature: domain Description: chaperone_ClpB Location: 1 901 91 5-1 904471 bp Feature: gene Location: 1904982-1906388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1905324-1905942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 905324-1 905942 bp Feature: domain Description: GIIM Note: maturase Location: 1905996-1906206 bp Feature: domain Description: GIIM Note: maturase Location: 1 905996-1 906206 bp Feature: gene Location: 1906501-1908951 bp Feature: domain Description: CirA Location: 1906594-1908877 bp Feature: domain Description: CirA Location: 1 906594-1 908877 bp Feature: gene Location: 1909061-1909657 bp Feature: domain Description: AcrR Location: 1909088-1909463 bp Feature: domain Description: AcrR Location: 1 909088-1 909463 bp Feature: gene Location: 1930711-1931277 bp Feature: domain Description: RutF Location: 1930717-1931191 bp Feature: domain Description: RutF Location: 1 93071 7-1 931 1 91 bp Feature: gene Location: 1931810-1932421 bp Feature: domain Description: AcrR Location: 1931825-1932317 bp Feature: domain Description: AcrR Location: 1 931 825-1 93231 7 bp Feature: gene Location: 1933001-1934407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1933343-1933961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 933343-1 933961 bp Feature: domain Description: GIIM Note: maturase Location: 1934015-1934225 bp Feature: domain Description: GIIM Note: maturase Location: 1 93401 5-1 934225 bp Feature: gene Location: 1934513-1934881 bp Feature: gene Location: 1935153-1936130 bp Feature: domain Description: PRK07565 Location: 1935162-1936125 bp Feature: domain Description: PRK07565 Location: 1 9351 62-1 9361 25 bp Feature: gene Location: 2831576-2831848 bp Feature: gene Location: 2832068-2833723 bp Feature: domain Description: COG3666 Location: 2832083-2832551 bp Feature: domain Description: COG3666 Location: 2832083-2832551 bp Feature: domain Description: DDE_Tnp_1_6 Location: 2833229-2833604 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 2833229-2833604 bp Feature: gene Location: 2833902-2835308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2834244-2834862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2834244-2834862 bp Feature: domain Description: GIIM Note: maturase Location: 2834916-2835120 bp Feature: domain Description: GIIM Note: maturase Location: 283491 6-28351 20 bp Feature: gene Location: 2835990-2837024 bp Feature: domain Description: Virulence_RhuM Location: 2836200-2836953 bp Feature: domain Description: Virulence_RhuM Location: 2836200-2836953 bp Feature: gene Location: 2837174-2839084 bp Feature: domain Description: dnaK Location: 2837177-2839082 bp Feature: domain Description: dnaK Location: 28371 77-2839082 bp Feature: gene Location: 2857205-2859565 bp Feature: domain Description: DUF5118 Location: 2857331-2857433 bp Feature: domain Description: DUF51 1 8 Location: 2857331 -2857433 bp Feature: domain Description: DUF5117 Location: 2857484-2858039 bp Feature: domain Description: DUF51 1 7 Location: 2857484-2858039 bp Feature: domain Description: ZnMc_MMP_like_2 Location: 2858075-2858423 bp Feature: domain Description: ZnMc_MMP_like_2 Location: 2858075-2858423 bp Feature: domain Description: DUF4953 Location: 2858444-2859332 bp Feature: domain Description: DUF4953 Location: 2858444-2859332 bp Feature: gene Location: 2859580-2861649 bp Feature: domain Description: DUF5118 Location: 2859688-2859802 bp Feature: domain Description: DUF51 1 8 Location: 2859688-2859802 bp Feature: domain Description: DUF5117 Location: 2859850-2860375 bp Feature: domain Description: DUF51 1 7 Location: 2859850-2860375 bp Feature: domain Description: ZnMc_MMP_like_2 Location: 2860423-2860762 bp Feature: domain Description: ZnMc_MMP_like_2 Location: 2860423-2860762 bp Feature: domain Description: DUF4953 Location: 2861026-2861428 bp Feature: domain Description: DUF4953 Location: 2861 026-2861 428 bp Feature: gene Location: 2861898-2863304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2862240-2862858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2862240-2862858 bp Feature: domain Description: GIIM Note: maturase Location: 2862912-2863122 bp Feature: domain Description: GIIM Note: maturase Location: 286291 2-28631 22 bp Feature: gene Location: 2863765-2865546 bp Feature: domain Description: Mfa_like_1 Location: 2863936-2864626 bp Feature: domain Description: Mfa_like_1 Location: 2863936-2864626 bp Feature: gene Location: 2865787-2865978 bp Feature: domain Description: HTH_11 Location: 2865793-2865874 bp Feature: domain Description: HTH_1 1 Location: 2865793-2865874 bp Feature: gene Location: 3395790-3396293 bp Feature: domain Description: GAF Location: 3395814-3396279 bp Feature: domain Description: GAF Location: 339581 4-3396279 bp Feature: gene Location: 3396663-3397064 bp Feature: gene Location: 3397170-3398492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3397428-3398046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3397428-3398046 bp Feature: domain Description: GIIM Note: maturase Location: 3398100-3398304 bp Feature: domain Description: GIIM Note: maturase Location: 33981 00-3398304 bp Feature: gene Location: 3399418-3399768 bp Feature: domain Description: RsfS Location: 3399421-3399751 bp Feature: domain Description: RsfS Location: 3399421 -3399751 bp Feature: gene Location: 3399776-3401833 bp Feature: domain Description: HflB Location: 3399851-3401651 bp Feature: domain Description: HflB Location: 3399851 -3401 651 bp Feature: gene Location: 3643916-3647746 bp Feature: domain Description: COG3292 Location: 3644261-3644732 bp Feature: domain Description: COG3292 Location: 3644261 -3644732 bp Feature: domain Description: COG3292 Location: 3644783-3645764 bp Feature: domain Description: COG3292 Location: 3644783-3645764 bp Feature: domain Description: BaeS Location: 3645989-3646925 bp Feature: domain Description: BaeS Location: 3645989-3646925 bp Feature: domain Description: PRK11107 Location: 3646967-3647381 bp Feature: domain Description: PRK1 1 1 07 Location: 3646967-3647381 bp Feature: domain Description: YesN Location: 3647393-3647732 bp Feature: domain Description: YesN Location: 3647393-3647732 bp Feature: gene Location: 3647910-3649460 bp Feature: domain Description: COG5421 Location: 3648339-3648774 bp Feature: domain Description: COG5421 Location: 3648339-3648774 bp Feature: domain Description: COG5421 Location: 3649026-3649299 bp Feature: domain Description: COG5421 Location: 3649026-3649299 bp Feature: gene Location: 3649586-3650992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3649928-3650546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3649928-3650546 bp Feature: domain Description: GIIM Note: maturase Location: 3650600-3650804 bp Feature: domain Description: GIIM Note: maturase Location: 3650600-3650804 bp Feature: gene Location: 3651509-3653194 bp Feature: domain Description: SusD Location: 3651638-3652973 bp Feature: domain Description: SusD Location: 3651 638-3652973 bp Feature: gene Location: 3653228-3656365 bp Feature: domain Description: OMP_RagA_SusC Location: 3653303-3656357 bp Feature: domain Description: OMP_RagA_SusC Location: 3653303-3656357 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT