myRT

myRT report for GCA_900313425.1_Rumen_uncultured_genome_RUG799

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Seq: OMRH01000285.1 (5151 bp)
Overview 1 RT 1: 1646-5145 bp Neighborhood of RT #1 [1646, 5150] RVT-UG26 NHLM_micro_ABC1 Feature: gene Location: 1646-2164 bp Feature: gene Location: 2097-2357 bp Feature: gene Location: 2546-3847 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 2798-3419 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 2798-341 9 bp Feature: gene Location: 4425-5150 bp Feature: domain Description: NHLM_micro_ABC1 Location: 4431-5145 bp Feature: domain Description: NHLM_micro_ABC1 Location: 4431 -51 45 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26, NHLM_micro_ABC1 (TIGR03796)

Seq: OMRH01000039.1 (9382 bp)
Overview 1 RT 1: 1-3837 bp Neighborhood of RT #1 [1, 3837] DppB DppB PBP2_TmCBP_oligosaccharides_like RVT-DGRs ChiA1_BD Feature: gene Location: 1-828 bp Feature: domain Description: DppB Location: 22-187 bp Feature: domain Description: DppB Location: 2 2 -187 bp Feature: domain Description: DppB Location: 565-829 bp Feature: domain Description: DppB Location: 565-82 9 bp Feature: gene Location: 846-1595 bp Feature: domain Description: PBP2_TmCBP_oligosaccharides_like Location: 936-1527 bp Feature: domain Description: PBP2 _TmCBP_oligosaccharides_like Location: 936-152 7 bp Feature: gene Location: 1443-2672 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1548-2265 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1548-2 2 65 bp Feature: gene Location: 2590-3411 bp Feature: domain Description: ChiA1_BD Location: 3118-3229 bp Feature: domain Description: ChiA1_BD Location: 3118-32 2 9 bp Feature: gene Location: 3553-3837 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DppB (COG0601), PBP2_TmCBP_oligosaccharides_like (cd08509), RVT-DGRs, ChiA1_BD (cd12214)

Seq: OMRH01000296.1 (4677 bp)
Overview 1 RT 1: 1-1716 bp Neighborhood of RT #1 [1, 1716] RVT-UG27 DUF2958 Feature: gene Location: 1-522 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 196-484 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 196-484 bp Feature: gene Location: 536-1336 bp Feature: domain Description: DUF2958 Location: 1028-1322 bp Feature: domain Description: DUF2958 Location: 1028-13 22 bp Feature: gene Location: 1390-1716 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27, DUF2958 (pfam11171)