myRT

myRT report for GCA_900313905.1_Rumen_uncultured_genome_hRUG864

Download annotations/find similar RTs

Seq: OMTG01000060.1 (10570 bp)
Overview 1 RT 1: 4427-9840 bp Neighborhood of RT #1 [4427, 10568] KOG4768 RVT-GII BglX PLN03080 PRK15098 BglX Peptidases_S8_Subtilisin_like_2 Feature: gene Location: 4427-4741 bp Feature: gene Location: 4858-5130 bp Feature: domain Description: KOG4768 Location: 4864-5005 bp Feature: domain Description: KOG4768 Location: 4864-5005 bp Feature: gene Location: 5140-5406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5272-5395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5272-5395 bp Feature: gene Location: 5450-8434 bp Feature: domain Description: BglX Location: 5609-5777 bp Feature: domain Description: BglX Location: 5609-5777 bp Feature: domain Description: PLN03080 Location: 6101-6362 bp Feature: domain Description: PLN03080 Location: 61 01 -6362 bp Feature: domain Description: PRK15098 Location: 6614-6923 bp Feature: domain Description: PRK1 5098 Location: 661 4-6923 bp Feature: domain Description: BglX Location: 7538-8264 bp Feature: domain Description: BglX Location: 7538-8264 bp Feature: gene Location: 8742-10568 bp Feature: domain Description: Peptidases_S8_Subtilisin_like_2 Location: 8916-9840 bp Feature: domain Description: Peptidases_S8_Subtilisin_like_2 Location: 891 6-9840 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RVT-GII, BglX (COG1472), PLN03080 (Probable beta-xylosidase; Provisional), PRK15098 (beta-glucosidase BglX), Peptidases_S8_Subtilisin_like_2 (cd04847)

Seq: OMTG01000069.1 (3108 bp)
Overview 1 RT 1: 81-2720 bp Neighborhood of RT #1 [81, 2720] RVT-CRISPR cas1_HMARI Cas2_I_II_III Feature: gene Location: 81-305 bp Feature: gene Location: 323-2245 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 533-1106 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 533-1106 bp Feature: domain Description: cas1_HMARI Location: 1259-2228 bp Feature: domain Description: cas1_HMARI Location: 12 59-2 2 2 8 bp Feature: gene Location: 2287-2547 bp Feature: domain Description: Cas2_I_II_III Location: 2296-2518 bp Feature: domain Description: Cas2 _I_II_III Location: 2 2 96-2 518 bp Feature: gene Location: 2583-2720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, cas1_HMARI (TIGR03641), Cas2_I_II_III (cl11442)