myRT

myRT report for GCA_900315135.1_Rumen_uncultured_genome_RUG073

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Seq: OMXY01000089.1 (5249 bp)
Overview 1 RT 1: 1870-5109 bp Neighborhood of RT #1 [1870, 5114] RVT-GII Feature: gene Location: 1870-4482 bp Feature: gene Location: 4513-4923 bp Feature: gene Location: 4923-5114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4932-5109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4932-51 09 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: OMXY01000090.1 (5030 bp)
Overview 1 RT 1: 2673-4978 bp Neighborhood of RT #1 [2673, 4978] RVT-GII YifB Feature: gene Location: 2673-2900 bp Feature: gene Location: 3069-3239 bp Feature: gene Location: 3414-3821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3423-3807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 342 3-3807 bp Feature: gene Location: 4060-4569 bp Feature: domain Description: YifB Location: 4063-4546 bp Feature: domain Description: YifB Location: 4063-4546 bp Feature: gene Location: 4568-4978 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, YifB (COG0606)

Seq: OMXY01000044.1 (23594 bp)
Overview 1 RT 1: 560-5505 bp Neighborhood of RT #1 [560, 5609] RVT-GII RVT-GII GIIM FeS_assembly_P ParA TPR PD40 PD40 Peptidase_M14NE-CP-C_like OmpA Feature: gene Location: 560-727 bp Feature: gene Location: 818-1021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 824-995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 824-995 bp Feature: gene Location: 1042-1737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1045-1255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1045-1255 bp Feature: domain Description: GIIM Note: maturase Location: 1309-1519 bp Feature: domain Description: GIIM Note: maturase Location: 13 09-1519 bp Feature: gene Location: 2268-3368 bp Feature: domain Description: FeS_assembly_P Location: 2292-2499 bp Feature: domain Description: FeS_assembly_P Location: 2292-2499 bp Feature: domain Description: ParA Location: 2556-3303 bp Feature: domain Description: ParA Location: 2556-3 3 03 bp Feature: gene Location: 3543-5609 bp Feature: domain Description: TPR Location: 3615-3909 bp Feature: domain Description: TPR Location: 3 615-3 909 bp Feature: domain Description: PD40 Location: 4407-4485 bp Feature: domain Description: PD40 Location: 4407-4485 bp Feature: domain Description: PD40 Location: 4527-4641 bp Feature: domain Description: PD40 Location: 4527-4641 bp Feature: domain Description: Peptidase_M14NE-CP-C_like Location: 4830-5052 bp Feature: domain Description: Peptidase_M14NE-CP-C_like Location: 483 0-5052 bp Feature: domain Description: OmpA Location: 5082-5505 bp Feature: domain Description: OmpA Location: 5082-5505 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), FeS_assembly_P (pfam01883), ParA (pfam10609), TPR (smart00028), PD40 (pfam07676), Peptidase_M14NE-CP-C_like (cl21470), OmpA (pfam00691)

Seq: OMXY01000080.1 (6569 bp)
Overview 1 RT 1: 2001-6218 bp Neighborhood of RT #1 [2001, 6568] RVT-GII GIIM OmpA Smc Feature: gene Location: 2001-2240 bp Feature: gene Location: 2580-2837 bp Feature: gene Location: 2838-4175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3039-3657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3039-3657 bp Feature: domain Description: GIIM Note: maturase Location: 3711-3924 bp Feature: domain Description: GIIM Note: maturase Location: 3711-3924 bp Feature: gene Location: 4349-5617 bp Feature: domain Description: OmpA Location: 5315-5561 bp Feature: domain Description: OmpA Location: 5315-5561 bp Feature: gene Location: 5669-6568 bp Feature: domain Description: Smc Location: 5795-6218 bp Feature: domain Description: Smc Location: 5795-6218 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), OmpA (pfam00691), Smc (COG1196)

Seq: OMXY01000126.1 (2152 bp)
Overview 1 RT 1: 96-2030 bp Neighborhood of RT #1 [96, 2149] RVT-GII Feature: gene Location: 96-347 bp Feature: gene Location: 443-652 bp Feature: gene Location: 1070-2149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1412-2030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1412-2030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII