myRT

myRT report for GCA_900316495.1_Rumen_uncultured_genome_RUG198

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Seq: ONDC01000033.1 (44068 bp)
Overview 1 RT 1: 37815-43697 bp Neighborhood of RT #1 [37815, 43885] PRK06836 AmyAc_arch_bac_AmyA Bac_A_amyl_C RVT-GII GIIM BID_2 CBM_X2 Feature: gene Location: 37815-39005 bp Feature: domain Description: PRK06836 Location: 37818-38991 bp Feature: domain Description: PRK06836 Location: 3781 8-38991 bp Feature: gene Location: 39022-40317 bp Feature: domain Description: AmyAc_arch_bac_AmyA Location: 39058-40072 bp Feature: domain Description: AmyAc_arch_bac_AmyA Location: 39058-40072 bp Feature: domain Description: Bac_A_amyl_C Location: 40105-40306 bp Feature: domain Description: Bac_A_amyl_C Location: 401 05-40306 bp Feature: gene Location: 40821-42212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41139-41763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 1 39-41 763 bp Feature: domain Description: GIIM Note: maturase Location: 41817-42030 bp Feature: domain Description: GIIM Note: maturase Location: 41 81 7-42030 bp Feature: gene Location: 42284-43885 bp Feature: domain Description: BID_2 Location: 42719-42938 bp Feature: domain Description: BID_2 Location: 4271 9-42938 bp Feature: domain Description: CBM_X2 Location: 43565-43697 bp Feature: domain Description: CBM_X2 Location: 43565-43697 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06836 (pyridoxal phosphate-dependent aminotransferase), AmyAc_arch_bac_AmyA (cd11313), Bac_A_amyl_C (pfam18612), RVT-GII, GIIM (pfam08388), BID_2 (smart00635), CBM_X2 (pfam03442)

Seq: ONDC01000222.1 (2796 bp)
Overview 1 RT 1: 1-2513 bp Neighborhood of RT #1 [1, 2513] RVT-CRISPR cas1_HMARI Feature: gene Location: 1-1644 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 202-781 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2 02 -781 bp Feature: domain Description: cas1_HMARI Location: 928-1645 bp Feature: domain Description: cas1_HMARI Location: 92 8-1645 bp Feature: gene Location: 2028-2192 bp Feature: gene Location: 2277-2513 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, cas1_HMARI (TIGR03641)

Seq: ONDC01000062.1 (17829 bp)
Overview 1 RT 1: 7970-12922 bp Neighborhood of RT #1 [7970, 12948] WG_beta_rep WG_beta_rep WG_beta_rep DDE_Tnp_1_4 RVT-GII trpE_most Feature: gene Location: 7970-9889 bp Feature: domain Description: WG_beta_rep Location: 8714-8798 bp Feature: domain Description: WG_beta_rep Location: 8714-8798 bp Feature: domain Description: WG_beta_rep Location: 8798-8924 bp Feature: domain Description: WG_beta_rep Location: 8798-8924 bp Feature: domain Description: WG_beta_rep Location: 8930-9029 bp Feature: domain Description: WG_beta_rep Location: 893 0-9029 bp Feature: gene Location: 10109-10636 bp Feature: domain Description: DDE_Tnp_1_4 Location: 10130-10391 bp Feature: domain Description: DDE_Tnp_1_4 Location: 1013 0-103 91 bp Feature: gene Location: 10801-11031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10837-10975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1083 7-10975 bp Feature: gene Location: 11204-11461 bp Feature: gene Location: 11482-12948 bp Feature: domain Description: trpE_most Location: 11575-12922 bp Feature: domain Description: trpE_most Location: 11575-12922 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WG_beta_rep (pfam14903), DDE_Tnp_1_4 (pfam13701), RVT-GII, trpE_most (TIGR00564)