myRT

myRT report for GCA_900320125.1_Rumen_uncultured_genome_RUG558

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Seq: ONRA01000004.1 (125405 bp)
Overview 1 RT 1: 106015-125342 bp Neighborhood of RT #1 [106015, 125404] Virulence_RhuM COG1373 RVT-UG3 RVT-UG8 COG3177 NACHT TIR_2 RVT-Retrons TPR TPR_12 SpoIIIAH HTH_23 Feature: gene Location: 106015-107031 bp Feature: domain Description: Virulence_RhuM Location: 106231-106945 bp Feature: domain Description: Virulence_RhuM Location: 1 06231 -1 06945 bp Feature: gene Location: 107714-108991 bp Feature: domain Description: COG1373 Location: 107759-108839 bp Feature: domain Description: COG1 373 Location: 1 07759-1 08839 bp Feature: gene Location: 109698-111161 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 110154-110685 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 1 01 54-1 1 0685 bp Feature: gene Location: 111158-113344 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 111773-112229 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 1 1 773-1 1 2229 bp Feature: gene Location: 114021-115088 bp Feature: domain Description: COG3177 Location: 114084-115074 bp Feature: domain Description: COG31 77 Location: 1 1 4084-1 1 5074 bp Feature: gene Location: 115159-119088 bp Feature: domain Description: NACHT Location: 115393-115828 bp Feature: domain Description: NACHT Location: 1 1 5393-1 1 5828 bp Feature: gene Location: 119607-120299 bp Feature: domain Description: TIR_2 Location: 119631-119904 bp Feature: domain Description: TIR_2 Location: 1 1 9631 -1 1 9904 bp Feature: gene Location: 120472-121734 bp Feature: gene Location: 121902-122999 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 122121-122754 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 221 21 -1 22754 bp Feature: gene Location: 123848-125404 bp Feature: domain Description: TPR Location: 123914-124130 bp Feature: domain Description: TPR Location: 1 2391 4-1 241 30 bp Feature: domain Description: TPR_12 Location: 124172-124304 bp Feature: domain Description: TPR_1 2 Location: 1 241 72-1 24304 bp Feature: domain Description: SpoIIIAH Location: 124709-125015 bp Feature: domain Description: SpoIIIAH Location: 1 24709-1 2501 5 bp Feature: domain Description: HTH_23 Location: 125240-125342 bp Feature: domain Description: HTH_23 Location: 1 25240-1 25342 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Virulence_RhuM (pfam13310), COG1373 (Predicted ATPase, AAA+ superfamily ), RVT-UG3, RVT-UG8, COG3177 (Fic family protein ), NACHT (pfam05729), TIR_2 (pfam13676), RVT-Retrons, TPR (smart00028), TPR_12 (pfam13424)
SpoIIIAH (pfam12685), HTH_23 (pfam13384)