myRT

myRT report for GCA_900406635.1_Escherichia_coli_ST156_strain_KCRI-82

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Seq: OVBU01000053.1 (17550 bp)
Overview 1 RT 1: 10742-14724 bp Neighborhood of RT #1 [10742, 14750] Asparaginase_2 RVT-GII DcuC Feature: gene Location: 10742-11773 bp Feature: domain Description: Asparaginase_2 Location: 10832-11765 bp Feature: domain Description: Asparaginase_2 Location: 1 0832-1 1 765 bp Feature: gene Location: 12100-12249 bp Feature: gene Location: 12297-12743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12603-12705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2603-1 2705 bp Feature: gene Location: 12965-13336 bp Feature: gene Location: 13389-14750 bp Feature: domain Description: DcuC Location: 13392-14724 bp Feature: domain Description: DcuC Location: 1 3392-1 4724 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asparaginase_2 (pfam01112), RVT-GII, DcuC (TIGR00771)

Seq: OVBU01000070.1 (6249 bp)
Overview 1 RT 1: 2-4189 bp Neighborhood of RT #1 [2, 4189] PRK11447 RAYT RVT-GII GIIM Feature: gene Location: 2-1069 bp Feature: domain Description: PRK11447 Location: 5-1070 bp Feature: domain Description: PRK11447 Location: 5-1070 bp Feature: gene Location: 1415-1954 bp Feature: domain Description: RAYT Location: 1493-1856 bp Feature: domain Description: RAYT Location: 1493-1856 bp Feature: gene Location: 2108-3454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2396-3014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 396-3014 bp Feature: domain Description: GIIM Note: maturase Location: 3062-3293 bp Feature: domain Description: GIIM Note: maturase Location: 3062 -32 93 bp Feature: gene Location: 3485-3682 bp Feature: gene Location: 4046-4189 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11447 (cellulose synthase subunit BcsC; Provisional), RAYT (COG1943), RVT-GII, GIIM (pfam08388)

Seq: OVBU01000016.1 (105003 bp)
Overview 1 RT 1: 85093-95388 bp Neighborhood of RT #1 [85093, 95405] Resolvase RVT-Retrons HTH_XRE DUF4062 PRK09692 RVT-UG7 Psu Feature: gene Location: 85093-85758 bp Feature: domain Description: Resolvase Location: 85114-85531 bp Feature: domain Description: Resolvase Location: 85114-8553 1 bp Feature: gene Location: 85807-85989 bp Feature: gene Location: 86026-87732 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 86176-86773 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 86176-86773 bp Feature: gene Location: 87869-88366 bp Feature: gene Location: 88606-89067 bp Feature: domain Description: HTH_XRE Location: 88636-88804 bp Feature: domain Description: HTH_XRE Location: 8863 6-88804 bp Feature: gene Location: 89098-90279 bp Feature: domain Description: DUF4062 Location: 89113-89440 bp Feature: domain Description: DUF4062 Location: 89113 -89440 bp Feature: gene Location: 90988-92172 bp Feature: domain Description: PRK09692 Location: 90994-92149 bp Feature: domain Description: PRK09692 Location: 90994-92149 bp Feature: gene Location: 92165-93793 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 92573-93002 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 92573 -93 002 bp Feature: gene Location: 93790-94530 bp Feature: gene Location: 94833-95405 bp Feature: domain Description: Psu Location: 94851-95388 bp Feature: domain Description: Psu Location: 94851-953 88 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), RVT-Retrons, HTH_XRE (smart00530), DUF4062 (pfam13271), PRK09692 (Integrase; provisional), RVT-UG7, Psu (pfam07455)

Seq: OVBU01000118.1 (590 bp)
Overview 1 RT 1: 2-572 bp Neighborhood of RT #1 [2, 589] RVT-UNC Feature: gene Location: 2-589 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 200-572 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 200-572 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG10/RVT-DGRs/RVT-CRISPR/RVT-GII(RVT-UNC)