myRT

myRT report for GCA_900445505.1_50450_E01

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Seq: UAQF01000004.1 (6491739 bp)
Overview 1 RT 1: 611595-615097 bp 2 RT 2: 1640883-1653150 bp 3 RT 3: 2178843-2186780 bp 4 RT 4: 3677465-3684590 bp 5 RT 5: 4588795-4594495 bp Neighborhood of RT #1 [611595, 615126] RVT-DGRs Avd_like DUF1566 Neighborhood of RT #2 [1640883, 1653275] rpsA DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 RVT-Retrons PDDEXK_2 Neighborhood of RT #3 [2178843, 2187394] BcsQ RVT_N RVT-GII GIIM N6_Mtase COG4646 Neighborhood of RT #4 [3677465, 3684604] RVT_N RVT-GII GIIM DDE_Tnp_IS66 DDE_Tnp_IS66_C COG3292 COG3292 COG3292 Reg_prop COG3292 Y_Y_Y BaeS PRK15347 YesN Neighborhood of RT #5 [4588795, 4594512] DUF4133 Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G DUF3876 Feature: gene Location: 611595-611888 bp Feature: gene Location: 612086-612364 bp Feature: gene Location: 612327-613748 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 612702-613404 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 61 2702-61 3404 bp Feature: gene Location: 613763-614170 bp Feature: domain Description: Avd_like Location: 613796-614105 bp Feature: domain Description: Avd_like Location: 61 3796-61 41 05 bp Feature: gene Location: 614317-615126 bp Feature: domain Description: DUF1566 Location: 614848-615097 bp Feature: domain Description: DUF1 566 Location: 61 4848-61 5097 bp Feature: gene Location: 1640883-1642685 bp Feature: domain Description: rpsA Location: 1640952-1642569 bp Feature: domain Description: rpsA Location: 1 640952-1 642569 bp Feature: gene Location: 1642782-1648739 bp Feature: domain Description: DUF4011 Location: 1644012-1644525 bp Feature: domain Description: DUF401 1 Location: 1 64401 2-1 644525 bp Feature: domain Description: DEXXQc_SF1 Location: 1644864-1645725 bp Feature: domain Description: DEXXQc_SF1 Location: 1 644864-1 645725 bp Feature: domain Description: DEXXQc_SF1 Location: 1646292-1647051 bp Feature: domain Description: DEXXQc_SF1 Location: 1 646292-1 647051 bp Feature: domain Description: TIGR00376 Location: 1647180-1647570 bp Feature: domain Description: TIGR00376 Location: 1 6471 80-1 647570 bp Feature: domain Description: MTES_1575 Location: 1647723-1648008 bp Feature: domain Description: MTES_1 575 Location: 1 647723-1 648008 bp Feature: domain Description: DUF3320 Location: 1648248-1648389 bp Feature: domain Description: DUF3320 Location: 1 648248-1 648389 bp Feature: gene Location: 1648741-1649871 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1649062-1649605 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 649062-1 649605 bp Feature: gene Location: 1650077-1652284 bp Feature: gene Location: 1652451-1653275 bp Feature: domain Description: PDDEXK_2 Location: 1652472-1653150 bp Feature: domain Description: PDDEXK_2 Location: 1 652472-1 6531 50 bp Feature: gene Location: 2178843-2179598 bp Feature: domain Description: BcsQ Location: 2178846-2179590 bp Feature: domain Description: BcsQ Location: 21 78846-21 79590 bp Feature: gene Location: 2179958-2181103 bp Feature: gene Location: 2181057-2182724 bp Feature: domain Description: RVT_N Location: 2181111-2181354 bp Feature: domain Description: RVT_N Location: 21 81 1 1 1 -21 81 354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2181399-2182047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 81 399-21 82047 bp Feature: domain Description: GIIM Note: maturase Location: 2182101-2182332 bp Feature: domain Description: GIIM Note: maturase Location: 21 821 01 -21 82332 bp Feature: gene Location: 2182739-2183020 bp Feature: gene Location: 2183381-2187394 bp Feature: domain Description: N6_Mtase Location: 2183645-2184281 bp Feature: domain Description: N6_Mtase Location: 21 83645-21 84281 bp Feature: domain Description: COG4646 Location: 2185046-2186780 bp Feature: domain Description: COG4646 Location: 21 85046-21 86780 bp Feature: gene Location: 3677465-3677689 bp Feature: gene Location: 3678052-3678333 bp Feature: gene Location: 3678348-3680015 bp Feature: domain Description: RVT_N Location: 3678402-3678645 bp Feature: domain Description: RVT_N Location: 3678402-3678645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3678690-3679338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3678690-3679338 bp Feature: domain Description: GIIM Note: maturase Location: 3679392-3679623 bp Feature: domain Description: GIIM Note: maturase Location: 3679392-3679623 bp Feature: gene Location: 3680151-3680549 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3680160-3680391 bp Feature: domain Description: DDE_Tnp_IS66 Location: 36801 60-3680391 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3680412-3680532 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 368041 2-3680532 bp Feature: gene Location: 3680588-3684604 bp Feature: domain Description: COG3292 Location: 3680651-3680822 bp Feature: domain Description: COG3292 Location: 3680651 -3680822 bp Feature: domain Description: COG3292 Location: 3680858-3681158 bp Feature: domain Description: COG3292 Location: 3680858-3681 1 58 bp Feature: domain Description: COG3292 Location: 3681251-3681494 bp Feature: domain Description: COG3292 Location: 3681 251 -3681 494 bp Feature: domain Description: Reg_prop Location: 3681527-3681578 bp Feature: domain Description: Reg_prop Location: 3681 527-3681 578 bp Feature: domain Description: COG3292 Location: 3681809-3682391 bp Feature: domain Description: COG3292 Location: 3681 809-3682391 bp Feature: domain Description: Y_Y_Y Location: 3682715-3682862 bp Feature: domain Description: Y_Y_Y Location: 368271 5-3682862 bp Feature: domain Description: BaeS Location: 3682988-3683741 bp Feature: domain Description: BaeS Location: 3682988-3683741 bp Feature: domain Description: PRK15347 Location: 3683852-3684185 bp Feature: domain Description: PRK1 5347 Location: 3683852-36841 85 bp Feature: domain Description: YesN Location: 3684290-3684590 bp Feature: domain Description: YesN Location: 3684290-3684590 bp Feature: gene Location: 4588795-4589115 bp Feature: domain Description: DUF4133 Location: 4588810-4589080 bp Feature: domain Description: DUF41 33 Location: 458881 0-4589080 bp Feature: gene Location: 4589112-4591511 bp Feature: domain Description: Bac_Flav_CT_G Location: 4589115-4591500 bp Feature: domain Description: Bac_Flav_CT_G Location: 45891 1 5-4591 500 bp Feature: gene Location: 4592080-4593903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4592344-4593166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4592344-45931 66 bp Feature: domain Description: Intron_maturas2 Location: 4593331-4593583 bp Feature: domain Description: Intron_maturas2 Location: 4593331 -4593583 bp Feature: domain Description: HNHc Note: nucleases Location: 4593694-4593865 bp Feature: domain Description: HNHc Note: nucleases Location: 4593694-4593865 bp Feature: gene Location: 4594007-4594144 bp Feature: domain Description: Bac_Flav_CT_G Location: 4594013-4594109 bp Feature: domain Description: Bac_Flav_CT_G Location: 459401 3-45941 09 bp Feature: gene Location: 4594141-4594512 bp Feature: domain Description: DUF3876 Location: 4594222-4594495 bp Feature: domain Description: DUF3876 Location: 4594222-4594495 bp Sorry, your browser does not support inline SVG.
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