myRT

myRT report for GCA_900445575.1_51470_C02

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Seq: UFTB01000001.1 (3313883 bp)
Overview 1 RT 1: 1194699-1200950 bp 2 RT 2: 2069056-2078229 bp Neighborhood of RT #1 [1194699, 1200973] TnpB_IS66 LZ_Tnp_IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-Retrons COG2865 Neighborhood of RT #2 [2069056, 2078229] GH130 aman2_put RVT-UG8 RVT-UG3 Mob_Pre Feature: gene Location: 1194699-1195067 bp Feature: domain Description: TnpB_IS66 Location: 1194726-1195008 bp Feature: domain Description: TnpB_IS66 Location: 1 1 94726-1 1 95008 bp Feature: gene Location: 1195148-1196698 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1195241-1195478 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 1 95241 -1 1 95478 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1195700-1196540 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 1 95700-1 1 96540 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1196564-1196678 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 1 96564-1 1 96678 bp Feature: gene Location: 1197414-1198274 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1197564-1198095 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 97564-1 1 98095 bp Feature: gene Location: 1198603-1198833 bp Feature: gene Location: 1199591-1200973 bp Feature: domain Description: COG2865 Location: 1199600-1200950 bp Feature: domain Description: COG2865 Location: 1 1 99600-1 200950 bp Feature: gene Location: 2069056-2070024 bp Feature: domain Description: GH130 Location: 2069164-2069995 bp Feature: domain Description: GH1 30 Location: 20691 64-2069995 bp Feature: gene Location: 2070030-2072303 bp Feature: domain Description: aman2_put Location: 2070117-2072289 bp Feature: domain Description: aman2_put Location: 20701 1 7-2072289 bp Feature: gene Location: 2072855-2075053 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2073470-2073938 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2073470-2073938 bp Feature: gene Location: 2075050-2076513 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 2075506-2076037 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 2075506-2076037 bp Feature: gene Location: 2076689-2077945 bp Feature: domain Description: Mob_Pre Location: 2076695-2077322 bp Feature: domain Description: Mob_Pre Location: 2076695-2077322 bp Feature: gene Location: 2078008-2078229 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-Retrons, COG2865 (Predicted transcriptional regulator, contains HTH domain ), GH130 (cd18615), aman2_put (TIGR01180), RVT-UG8, RVT-UG3
Mob_Pre (pfam01076)