myRT

myRT report for GCA_900446165.1_43781_C01

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Seq: UARA01000004.1 (306535 bp)
Overview 1 RT 1: 138486-143069 bp Neighborhood of RT #1 [138486, 143069] D RVT-GII HipB Feature: gene Location: 138486-139556 bp Feature: domain Description: D Location: 138540-139524 bp Feature: domain Description: D Location: 1 38540-1 39524 bp Feature: gene Location: 139744-140088 bp Feature: gene Location: 140168-141700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 140579-141269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 40579-1 41 269 bp Feature: gene Location: 142272-142763 bp Feature: domain Description: HipB Location: 142284-142500 bp Feature: domain Description: HipB Location: 1 42284-1 42500 bp Feature: gene Location: 142896-143069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UARA01000012.1 (236841 bp)
Overview 1 RT 1: 46550-51916 bp Neighborhood of RT #1 [46550, 51921] MFS_MucK Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 46550-47797 bp Feature: domain Description: MFS_MucK Location: 46640-47774 bp Feature: domain Description: MFS_MucK Location: 46640-47774 bp Feature: gene Location: 48101-48430 bp Feature: domain Description: Histone_HNS Location: 48122-48359 bp Feature: domain Description: Histone_HNS Location: 4812 2 -48359 bp Feature: gene Location: 48756-50105 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49221-49857 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 492 2 1-49857 bp Feature: gene Location: 50359-50931 bp Feature: domain Description: FIN Location: 50545-50896 bp Feature: domain Description: FIN Location: 50545-50896 bp Feature: gene Location: 51166-51921 bp Feature: domain Description: his_ut_repres Location: 51244-51916 bp Feature: domain Description: his_ut_repres Location: 512 44-51916 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UARA01000016.1 (1351219 bp)
Overview 1 RT 1: 577472-584015 bp Neighborhood of RT #1 [577472, 584029] PRK08133 COG3547 RVT-GII GIIM GDP_MD_SDR_e Gmd Feature: gene Location: 577472-578662 bp Feature: domain Description: PRK08133 Location: 577478-578657 bp Feature: domain Description: PRK0813 3 Location: 577478-578657 bp Feature: gene Location: 579339-580373 bp Feature: domain Description: COG3547 Location: 579354-580317 bp Feature: domain Description: COG3 547 Location: 5793 54-5803 17 bp Feature: gene Location: 580622-581911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 580877-581492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 580877-581492 bp Feature: domain Description: GIIM Note: maturase Location: 581552-581753 bp Feature: domain Description: GIIM Note: maturase Location: 581552-581753 bp Feature: gene Location: 582031-582921 bp Feature: domain Description: GDP_MD_SDR_e Location: 582034-582889 bp Feature: domain Description: GDP_MD_SDR_e Location: 58203 4-582889 bp Feature: gene Location: 582983-584029 bp Feature: domain Description: Gmd Location: 582998-584015 bp Feature: domain Description: Gmd Location: 582998-584015 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UARA01000009.1 (438094 bp)
Overview 1 RT 1: 233479-241303 bp Neighborhood of RT #1 [233479, 241303] ALDH_F7_AASADH COG3547 RVT-GII GIIM MscK Feature: gene Location: 233479-235119 bp Feature: domain Description: ALDH_F7_AASADH Location: 233662-235078 bp Feature: domain Description: ALDH_F7_AASADH Location: 233662-235078 bp Feature: gene Location: 235809-236843 bp Feature: domain Description: COG3547 Location: 235824-236787 bp Feature: domain Description: COG354 7 Location: 235824 -236787 bp Feature: gene Location: 237092-238381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 237347-237962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23734 7-237962 bp Feature: domain Description: GIIM Note: maturase Location: 238022-238223 bp Feature: domain Description: GIIM Note: maturase Location: 238022-238223 bp Feature: gene Location: 238525-240987 bp Feature: domain Description: MscK Location: 238603-240946 bp Feature: domain Description: MscK Location: 238603-24 094 6 bp Feature: gene Location: 240995-241303 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UARA01000001.1 (103500 bp)
Overview 1 RT 1: 16-2003 bp 2 RT 2: 90549-97246 bp Neighborhood of RT #1 [16, 2038] RVT-GII group_II_RT_mat SRAP Neighborhood of RT #2 [90549, 97246] PolY_like COG4544 RVT-GII SRAP Feature: gene Location: 16-171 bp Feature: gene Location: 210-617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 252-588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25 2-5 88 bp Feature: gene Location: 622-1020 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 631-847 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 631-847 bp Feature: gene Location: 1076-2038 bp Feature: domain Description: SRAP Location: 1487-2003 bp Feature: domain Description: SRAP Location: 1487-2003 bp Feature: gene Location: 90549-91928 bp Feature: domain Description: PolY_like Location: 90555-91455 bp Feature: domain Description: PolY_like Location: 905 5 5 -9145 5 bp Feature: gene Location: 91948-92664 bp Feature: domain Description: COG4544 Location: 92053-92488 bp Feature: domain Description: COG45 44 Location: 9205 3-92488 bp Feature: gene Location: 93065-94597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93476-94166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93476-94166 bp Feature: gene Location: 94653-95615 bp Feature: domain Description: SRAP Location: 95064-95580 bp Feature: domain Description: SRAP Location: 95 064-95 5 80 bp Feature: gene Location: 96260-97246 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT