myRT

myRT report for GCA_900446855.1_59178_F02

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Seq: UAWB01000002.1 Chryseobacterium jejuense strain NCTC13492 genome assembly, contig: ERS1943185SCcontig000002, whole genome shotgun sequence (1788397 bp)
Overview 1 RT 1: 975761-981990 bp 2 RT 2: 1242074-1247391 bp Neighborhood of RT #1 [975761, 981990] HTH_ARAC McrA HNHc RVT-UG28b VirE_N PriCT_2 Neighborhood of RT #2 [1242074, 1247441] RVT-UG5 nitrilase DUF4238 Feature: gene Location: 975761-976789 bp Ori: SQB27647.1 Feature: domain Description: HTH_ARAC Location: 976532-976778 bp Feature: domain Description: HTH_ARAC Location: 976532-976778 bp Feature: gene Location: 977274-977972 bp Ori: SQB27648.1 Feature: domain Description: McrA Location: 977289-977490 bp Feature: domain Description: McrA Location: 977289-977490 bp Feature: domain Description: HNHc Note: nucleases Location: 977553-977649 bp Feature: domain Description: HNHc Note: nucleases Location: 977553-977649 bp Feature: gene Location: 978073-980025 bp Ori: SQB27649.1 Gene: ltrA Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 978508-979234 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 978508-979234 bp Feature: gene Location: 980192-981178 bp Ori: SQB27650.1 Feature: domain Description: VirE_N Location: 980363-980741 bp Feature: domain Description: VirE_N Location: 980363-980741 bp Feature: domain Description: PriCT_2 Location: 980933-981158 bp Feature: domain Description: PriCT_2 Location: 980933-981 1 58 bp Feature: gene Location: 981313-981990 bp Feature: gene Location: 1242074-1242295 bp Feature: gene Location: 1242459-1242767 bp Feature: gene Location: 1243313-1245442 bp Ori: SQB27915.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1243877-1244339 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 243877-1 244339 bp Feature: gene Location: 1245432-1246505 bp Ori: SQB27916.1 Feature: domain Description: nitrilase Location: 1245750-1246410 bp Feature: domain Description: nitrilase Location: 1 245750-1 24641 0 bp Feature: gene Location: 1246575-1247441 bp Ori: SQB27917.1 Feature: domain Description: DUF4238 Location: 1246593-1247391 bp Feature: domain Description: DUF4238 Location: 1 246593-1 247391 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARAC (smart00342), McrA (COG4058), HNHc (smart00507), RVT-UG28b, VirE_N (pfam08800), PriCT_2 (pfam08707), RVT-UG5, nitrilase (cl11424), DUF4238 (pfam14022)