myRT

myRT report for GCA_900447055.1_45296_C02

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Seq: UFWB01000003.1 (4142653 bp)
Overview 1 RT 1: 398686-404651 bp 2 RT 2: 566926-573457 bp 3 RT 3: 856275-862214 bp 4 RT 4: 2283237-2289624 bp 5 RT 5: 2827893-2837070 bp 6 RT 6: 2842503-2844294 bp 7 RT 7: 3518891-3524987 bp 8 RT 8: 3745357-3752765 bp 9 RT 9: 3796239-3802269 bp Neighborhood of RT #1 [398686, 404689] RVT-GII HTH_ARSR Neighborhood of RT #2 [566926, 574290] VirB4_CagE VirB4_CagE Maff2 RVT-GII Neighborhood of RT #3 [856275, 862214] DUF1648 RVT-GII HNHc Rol_Rep_N Rep_trans Neighborhood of RT #4 [2283237, 2289767] COG3981 RVT-GII HNHc Rol_Rep_N Rep_trans FtsK Neighborhood of RT #5 [2827893, 2837936] UbiE TpcC RVT-GII Intron_maturas2 HNHc RVT-GII HNHc Lysozyme_like TrbL Neighborhood of RT #6 [2842503, 2844413] RVT-GII HNHc Neighborhood of RT #7 [3518891, 3525001] FtsK HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Neighborhood of RT #8 [3745357, 3752908] ArdA RVT-GII HNHc Rol_Rep_N Rep_trans FtsK Neighborhood of RT #9 [3796239, 3802283] HTH_ARAC AraC_E_bind TraG-D_C RVT-GII VirD4 DUF3801 Feature: gene Location: 398686-400593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 399016-399760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39901 6-399760 bp Feature: gene Location: 402395-402598 bp Feature: gene Location: 404324-404689 bp Feature: domain Description: HTH_ARSR Location: 404468-404651 bp Feature: domain Description: HTH_ARSR Location: 404468-404651 bp Feature: gene Location: 566926-569355 bp Feature: domain Description: VirB4_CagE Location: 567043-567487 bp Feature: domain Description: VirB4_CagE Location: 567043-567487 bp Feature: domain Description: VirB4_CagE Location: 567730-569236 bp Feature: domain Description: VirB4_CagE Location: 567730-569236 bp Feature: gene Location: 570615-570899 bp Feature: domain Description: Maff2 Location: 570687-570894 bp Feature: domain Description: Maff2 Location: 570687-570894 bp Feature: gene Location: 572383-574290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 572713-573457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57271 3-573457 bp Feature: gene Location: 856275-856565 bp Feature: gene Location: 856824-857153 bp Feature: domain Description: DUF1648 Location: 856863-856998 bp Feature: domain Description: DUF1 648 Location: 856863-856998 bp Feature: gene Location: 857568-859478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 857901-858639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 857901 -858639 bp Feature: domain Description: HNHc Note: nucleases Location: 859194-859359 bp Feature: domain Description: HNHc Note: nucleases Location: 8591 94-859359 bp Feature: gene Location: 860367-861269 bp Feature: domain Description: Rol_Rep_N Location: 860370-860547 bp Feature: domain Description: Rol_Rep_N Location: 860370-860547 bp Feature: domain Description: Rep_trans Location: 860571-861186 bp Feature: domain Description: Rep_trans Location: 860571 -861 1 86 bp Feature: gene Location: 861810-862214 bp Feature: gene Location: 2283237-2283767 bp Feature: domain Description: COG3981 Location: 2283246-2283762 bp Feature: domain Description: COG3981 Location: 2283246-2283762 bp Feature: gene Location: 2283851-2284012 bp Feature: gene Location: 2284179-2286089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2284512-2285250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 228451 2-2285250 bp Feature: domain Description: HNHc Note: nucleases Location: 2285805-2285970 bp Feature: domain Description: HNHc Note: nucleases Location: 2285805-2285970 bp Feature: gene Location: 2286972-2287934 bp Feature: domain Description: Rol_Rep_N Location: 2286978-2287203 bp Feature: domain Description: Rol_Rep_N Location: 2286978-2287203 bp Feature: domain Description: Rep_trans Location: 2287227-2287842 bp Feature: domain Description: Rep_trans Location: 2287227-2287842 bp Feature: gene Location: 2288373-2289767 bp Feature: domain Description: FtsK Location: 2289042-2289624 bp Feature: domain Description: FtsK Location: 2289042-2289624 bp Feature: gene Location: 2827893-2828504 bp Feature: domain Description: UbiE Location: 2827902-2828466 bp Feature: domain Description: UbiE Location: 2827902-2828466 bp Feature: gene Location: 2828616-2829509 bp Feature: domain Description: TpcC Location: 2828832-2829501 bp Feature: domain Description: TpcC Location: 2828832-2829501 bp Feature: gene Location: 2829759-2831555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2830026-2830836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2830026-2830836 bp Feature: domain Description: Intron_maturas2 Location: 2830902-2831214 bp Feature: domain Description: Intron_maturas2 Location: 2830902-2831 21 4 bp Feature: domain Description: HNHc Note: nucleases Location: 2831373-2831529 bp Feature: domain Description: HNHc Note: nucleases Location: 2831 373-2831 529 bp Feature: gene Location: 2831761-2832021 bp Feature: gene Location: 2832449-2832589 bp Feature: gene Location: 2832641-2834506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2832950-2833697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2832950-2833697 bp Feature: domain Description: HNHc Note: nucleases Location: 2834255-2834390 bp Feature: domain Description: HNHc Note: nucleases Location: 2834255-2834390 bp Feature: gene Location: 2835202-2835807 bp Feature: domain Description: Lysozyme_like Location: 2835349-2835793 bp Feature: domain Description: Lysozyme_like Location: 2835349-2835793 bp Feature: gene Location: 2835804-2837936 bp Feature: domain Description: TrbL Location: 2836713-2837070 bp Feature: domain Description: TrbL Location: 283671 3-2837070 bp Feature: gene Location: 2842503-2844413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2842836-2843574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2842836-2843574 bp Feature: domain Description: HNHc Note: nucleases Location: 2844129-2844294 bp Feature: domain Description: HNHc Note: nucleases Location: 28441 29-2844294 bp Feature: gene Location: 3518891-3519982 bp Feature: domain Description: FtsK Location: 3519209-3519839 bp Feature: domain Description: FtsK Location: 351 9209-351 9839 bp Feature: gene Location: 3520160-3521365 bp Feature: domain Description: HTH_XRE Location: 3520205-3520349 bp Feature: domain Description: HTH_XRE Location: 3520205-3520349 bp Feature: domain Description: Rol_Rep_N Location: 3520376-3520643 bp Feature: domain Description: Rol_Rep_N Location: 3520376-3520643 bp Feature: domain Description: Rep_trans Location: 3520667-3521276 bp Feature: domain Description: Rep_trans Location: 3520667-3521 276 bp Feature: gene Location: 3522149-3524059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3522482-3523220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3522482-3523220 bp Feature: domain Description: HNHc Note: nucleases Location: 3523775-3523940 bp Feature: domain Description: HNHc Note: nucleases Location: 3523775-3523940 bp Feature: gene Location: 3524220-3524387 bp Feature: gene Location: 3524504-3525001 bp Feature: domain Description: ArdA Location: 3524522-3524987 bp Feature: domain Description: ArdA Location: 3524522-3524987 bp Feature: gene Location: 3745357-3745839 bp Feature: domain Description: ArdA Location: 3745390-3745822 bp Feature: domain Description: ArdA Location: 3745390-3745822 bp Feature: gene Location: 3746174-3746968 bp Feature: gene Location: 3747335-3749245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3747668-3748406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3747668-3748406 bp Feature: domain Description: HNHc Note: nucleases Location: 3748961-3749126 bp Feature: domain Description: HNHc Note: nucleases Location: 3748961 -37491 26 bp Feature: gene Location: 3750134-3751198 bp Feature: domain Description: Rol_Rep_N Location: 3750212-3750476 bp Feature: domain Description: Rol_Rep_N Location: 375021 2-3750476 bp Feature: domain Description: Rep_trans Location: 3750500-3751115 bp Feature: domain Description: Rep_trans Location: 3750500-3751 1 1 5 bp Feature: gene Location: 3751514-3752908 bp Feature: domain Description: FtsK Location: 3752183-3752765 bp Feature: domain Description: FtsK Location: 37521 83-3752765 bp Feature: gene Location: 3796239-3797105 bp Feature: domain Description: HTH_ARAC Location: 3796317-3796551 bp Feature: domain Description: HTH_ARAC Location: 379631 7-3796551 bp Feature: domain Description: AraC_E_bind Location: 3796623-3797097 bp Feature: domain Description: AraC_E_bind Location: 3796623-3797097 bp Feature: gene Location: 3797269-3798201 bp Feature: domain Description: TraG-D_C Location: 3797659-3798013 bp Feature: domain Description: TraG-D_C Location: 3797659-379801 3 bp Feature: gene Location: 3798423-3800330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3798753-3799497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3798753-3799497 bp Feature: gene Location: 3800989-3801801 bp Feature: domain Description: VirD4 Location: 3801232-3801763 bp Feature: domain Description: VirD4 Location: 3801 232-3801 763 bp Feature: gene Location: 3801798-3802283 bp Feature: domain Description: DUF3801 Location: 3801867-3802269 bp Feature: domain Description: DUF3801 Location: 3801 867-3802269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UFWB01000001.1 (178471 bp)
Overview 1 RT 1: 45042-50673 bp Neighborhood of RT #1 [45042, 51443] RVT-GII RimI MobA_MobL Feature: gene Location: 45042-45212 bp Feature: gene Location: 45333-45596 bp Feature: gene Location: 45944-47851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46274-47018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 462 74-47018 bp Feature: gene Location: 49209-49682 bp Feature: domain Description: RimI Location: 49218-49665 bp Feature: domain Description: RimI Location: 492 18-49665 bp Feature: gene Location: 49743-51443 bp Feature: domain Description: MobA_MobL Location: 50001-50673 bp Feature: domain Description: MobA_MobL Location: 50001-50673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT