myRT

myRT report for GCA_900448405.1_36725_G01

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Seq: UGAD01000001.1 Escherichia coli strain NCTC7926 genome assembly, contig: ERS685292SCcontig000001, whole genome shotgun sequence (5020878 bp)
Overview 1 RT 1: 99946-103828 bp 2 RT 2: 4511461-4515744 bp Neighborhood of RT #1 [99946, 103833] rph pyrE RVT-Retrons slmA dut Neighborhood of RT #2 [4511461, 4515752] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 99946-100662 bp Feature: domain Description: rph Location: 99949-100657 bp Feature: domain Description: rph Location: 99949-1 00657 bp Feature: gene Location: 100713-101369 bp Feature: domain Description: pyrE Location: 100731-101364 bp Feature: domain Description: pyrE Location: 1 00731 -1 01 364 bp Feature: gene Location: 101667-102626 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 101802-102351 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 01 802-1 02351 bp Feature: gene Location: 102672-103268 bp Feature: domain Description: slmA Location: 102678-103254 bp Feature: domain Description: slmA Location: 1 02678-1 03254 bp Feature: gene Location: 103375-103833 bp Feature: domain Description: dut Location: 103381-103828 bp Feature: domain Description: dut Location: 1 03381 -1 03828 bp Feature: gene Location: 4511461-4512366 bp Feature: gene Location: 4512504-4512695 bp Feature: gene Location: 4512852-4513391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4513182-4513260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 451 31 82-451 3260 bp Feature: gene Location: 4513419-4513940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4513425-4513707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 451 3425-451 3707 bp Feature: domain Description: GIIM Note: maturase Location: 4513755-4513935 bp Feature: domain Description: GIIM Note: maturase Location: 451 3755-451 3935 bp Feature: gene Location: 4514262-4514450 bp Feature: gene Location: 4514490-4515752 bp Feature: domain Description: YesM Location: 4515003-4515744 bp Feature: domain Description: YesM Location: 451 5003-451 5744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576), RVT-GII, GIIM (pfam08388), YesM (COG2972)