myRT

myRT report for GCA_900448455.1_36725_H02

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Seq: UGAH01000002.1 Escherichia coli strain NCTC9776 genome assembly, contig: ERS685298SCcontig000002, whole genome shotgun sequence (5119331 bp)
Overview 1 RT 1: 98631-102513 bp 2 RT 2: 4609578-4613861 bp Neighborhood of RT #1 [98631, 102518] rph pyrE RVT-Retrons slmA dut Neighborhood of RT #2 [4609578, 4613869] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 98631-99347 bp Feature: domain Description: rph Location: 98634-99342 bp Feature: domain Description: rph Location: 98634-99342 bp Feature: gene Location: 99398-100054 bp Feature: domain Description: pyrE Location: 99416-100049 bp Feature: domain Description: pyrE Location: 9941 6-1 00049 bp Feature: gene Location: 100352-101311 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 100487-101036 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 00487-1 01 036 bp Feature: gene Location: 101357-101953 bp Feature: domain Description: slmA Location: 101363-101939 bp Feature: domain Description: slmA Location: 1 01 363-1 01 939 bp Feature: gene Location: 102060-102518 bp Feature: domain Description: dut Location: 102066-102513 bp Feature: domain Description: dut Location: 1 02066-1 0251 3 bp Feature: gene Location: 4609578-4610483 bp Feature: gene Location: 4610621-4610812 bp Feature: gene Location: 4610969-4611508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4611299-4611377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461 1 299-461 1 377 bp Feature: gene Location: 4611536-4612057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4611542-4611824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461 1 542-461 1 824 bp Feature: domain Description: GIIM Note: maturase Location: 4611872-4612052 bp Feature: domain Description: GIIM Note: maturase Location: 461 1 872-461 2052 bp Feature: gene Location: 4612379-4612567 bp Feature: gene Location: 4612607-4613869 bp Feature: domain Description: YesM Location: 4613120-4613861 bp Feature: domain Description: YesM Location: 461 31 20-461 3861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576), RVT-GII, GIIM (pfam08388), YesM (COG2972)