myRT

myRT report for GCA_900448685.1_38344_B02

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Seq: UGAQ01000001.1 (4731623 bp)
Overview 1 RT 1: 67789-71671 bp 2 RT 2: 1808605-1812234 bp Neighborhood of RT #1 [67789, 71676] rph pyrE RVT-Retrons slmA dut Neighborhood of RT #2 [1808605, 1812305] GDP_FS_SDR_e PRK15434 RVT-GII IS285 DDE_Tnp_1_assoc Feature: gene Location: 67789-68505 bp Feature: domain Description: rph Location: 67792-68500 bp Feature: domain Description: rph Location: 67792-68500 bp Feature: gene Location: 68556-69212 bp Feature: domain Description: pyrE Location: 68574-69207 bp Feature: domain Description: pyrE Location: 68574-69207 bp Feature: gene Location: 69510-70469 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 69645-70194 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 69645-701 94 bp Feature: gene Location: 70515-71111 bp Feature: domain Description: slmA Location: 70521-71097 bp Feature: domain Description: slmA Location: 70521 -71 097 bp Feature: gene Location: 71218-71676 bp Feature: domain Description: dut Location: 71224-71671 bp Feature: domain Description: dut Location: 71 224-71 671 bp Feature: gene Location: 1808605-1809570 bp Feature: domain Description: GDP_FS_SDR_e Location: 1808620-1809544 bp Feature: domain Description: GDP_FS_SDR_e Location: 1 808620-1 809544 bp Feature: gene Location: 1809573-1810046 bp Feature: domain Description: PRK15434 Location: 1809576-1810026 bp Feature: domain Description: PRK1 5434 Location: 1 809576-1 81 0026 bp Feature: gene Location: 1810748-1811041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1810919-1811027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 81 091 9-1 81 1 027 bp Feature: gene Location: 1811090-1811848 bp Feature: domain Description: IS285 Location: 1811120-1811810 bp Feature: domain Description: IS285 Location: 1 81 1 1 20-1 81 1 81 0 bp Feature: gene Location: 1811952-1812305 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 1811973-1812234 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 1 81 1 973-1 81 2234 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576), GDP_FS_SDR_e (cd05239), PRK15434 (GDP-mannose mannosyl hydrolase), RVT-GII, IS285 (COG3328), DDE_Tnp_1_assoc (pfam13808)