myRT

myRT report for GCA_900448845.1_38445_G01

Download annotations/find similar RTs

Seq: UGBG01000004.1 (201739 bp)
Overview 1 RT 1: 117844-121535 bp 2 RT 2: 184336-189011 bp Neighborhood of RT #1 [117844, 121549] PHA02517 InsE RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Neighborhood of RT #2 [184336, 189094] DDE_Tnp_1 DDE_Tnp_1 RVT-GII RVT-GII HTH_23 InsE HTH_23 HTH_33 DDE_3 Feature: gene Location: 117844-118683 bp Feature: domain Description: PHA02517 Location: 117868-118672 bp Feature: domain Description: PHA0251 7 Location: 1 1 7868-1 1 8672 bp Feature: gene Location: 118710-119012 bp Feature: domain Description: InsE Location: 118719-119001 bp Feature: domain Description: InsE Location: 1 1 871 9-1 1 9001 bp Feature: gene Location: 119642-120775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119744-120398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 9744-1 20398 bp Feature: domain Description: GIIM Note: maturase Location: 120476-120698 bp Feature: domain Description: GIIM Note: maturase Location: 1 20476-1 20698 bp Feature: gene Location: 120891-121037 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 120903-121014 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 20903-1 21 01 4 bp Feature: gene Location: 121064-121549 bp Feature: domain Description: COG3547 Location: 121082-121535 bp Feature: domain Description: COG3547 Location: 1 21 082-1 21 535 bp Feature: gene Location: 184336-185526 bp Feature: domain Description: DDE_Tnp_1 Location: 184630-185242 bp Feature: domain Description: DDE_Tnp_1 Location: 1 84630-1 85242 bp Feature: gene Location: 185729-186511 bp Feature: domain Description: DDE_Tnp_1 Location: 185735-186443 bp Feature: domain Description: DDE_Tnp_1 Location: 1 85735-1 86443 bp Feature: gene Location: 186537-186740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 186645-186735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 86645-1 86735 bp Feature: gene Location: 186801-187157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 186810-187131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8681 0-1 871 31 bp Feature: gene Location: 187251-187919 bp Feature: domain Description: HTH_23 Location: 187359-187446 bp Feature: domain Description: HTH_23 Location: 1 87359-1 87446 bp Feature: domain Description: InsE Location: 187575-187770 bp Feature: domain Description: InsE Location: 1 87575-1 87770 bp Feature: gene Location: 188063-189094 bp Feature: domain Description: HTH_23 Location: 188141-188282 bp Feature: domain Description: HTH_23 Location: 1 881 41 -1 88282 bp Feature: domain Description: HTH_33 Location: 188387-188534 bp Feature: domain Description: HTH_33 Location: 1 88387-1 88534 bp Feature: domain Description: DDE_3 Location: 188591-189011 bp Feature: domain Description: DDE_3 Location: 1 88591 -1 8901 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase ), DDE_Tnp_1 (pfam01609), HTH_23 (pfam13384), HTH_33 (pfam13592), DDE_3 (pfam13358)