myRT

myRT report for GCA_900449205.1_38732_C01

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Seq: UGCI01000003.1 (4967018 bp)
Overview 1 RT 1: 1967370-1972655 bp Neighborhood of RT #1 [1967370, 1972672] InsE PHA02517 RVT-GII GIIM PHA02517 LysM IAT_beta PRK15318 Invasin_D3 Feature: gene Location: 1967370-1967654 bp Feature: domain Description: InsE Location: 1967382-1967643 bp Feature: domain Description: InsE Location: 1 967382-1 967643 bp Feature: gene Location: 1967696-1968121 bp Feature: domain Description: PHA02517 Location: 1967717-1968056 bp Feature: domain Description: PHA0251 7 Location: 1 96771 7-1 968056 bp Feature: gene Location: 1968713-1970236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1968986-1969718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 968986-1 96971 8 bp Feature: domain Description: GIIM Note: maturase Location: 1969793-1969991 bp Feature: domain Description: GIIM Note: maturase Location: 1 969793-1 969991 bp Feature: gene Location: 1970359-1970793 bp Feature: domain Description: PHA02517 Location: 1970362-1970785 bp Feature: domain Description: PHA0251 7 Location: 1 970362-1 970785 bp Feature: gene Location: 1970795-1972672 bp Feature: domain Description: LysM Location: 1971035-1971173 bp Feature: domain Description: LysM Location: 1 971 035-1 971 1 73 bp Feature: domain Description: IAT_beta Location: 1971254-1972079 bp Feature: domain Description: IAT_beta Location: 1 971 254-1 972079 bp Feature: domain Description: PRK15318 Location: 1972280-1972403 bp Feature: domain Description: PRK1 531 8 Location: 1 972280-1 972403 bp Feature: domain Description: Invasin_D3 Location: 1972418-1972655 bp Feature: domain Description: Invasin_D3 Location: 1 97241 8-1 972655 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UGCI01000001.1 (146635 bp)
Overview 1 RT 1: 25536-29179 bp 2 RT 2: 67536-71138 bp 3 RT 3: 90938-98701 bp Neighborhood of RT #1 [25536, 29179] Ogr_Delta D RVT-GII GIIM Neighborhood of RT #2 [67536, 71263] RVT_N RVT-GII GIIM HNHc DUF1380 Neighborhood of RT #3 [90938, 98781] HTH_23 InsE Peptidase_S6 autotrans_barl RVT-GII GIIM DDE_Tnp_Tn3 Feature: gene Location: 25536-25796 bp Feature: domain Description: Ogr_Delta Location: 25545-25686 bp Feature: domain Description: Ogr_Delta Location: 2 5545-2 5686 bp Feature: gene Location: 25839-26210 bp Feature: domain Description: D Location: 25872-26184 bp Feature: domain Description: D Location: 2 5872 -2 6184 bp Feature: gene Location: 26348-27745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26699-27386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6699-2 7386 bp Feature: domain Description: GIIM Note: maturase Location: 27503-27671 bp Feature: domain Description: GIIM Note: maturase Location: 2 7503-2 7671 bp Feature: gene Location: 27585-28136 bp Feature: gene Location: 28490-29179 bp Feature: gene Location: 67536-67793 bp Feature: gene Location: 67824-68099 bp Feature: gene Location: 68673-70340 bp Feature: domain Description: RVT_N Location: 68721-68958 bp Feature: domain Description: RVT_N Location: 6872 1-68958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69009-69651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69009-69651 bp Feature: domain Description: GIIM Note: maturase Location: 69702-69936 bp Feature: domain Description: GIIM Note: maturase Location: 69702 -69936 bp Feature: domain Description: HNHc Note: nucleases Location: 70146-70305 bp Feature: domain Description: HNHc Note: nucleases Location: 70146-70305 bp Feature: gene Location: 70653-70844 bp Feature: gene Location: 70841-71263 bp Feature: domain Description: DUF1380 Location: 70844-71138 bp Feature: domain Description: DUF1380 Location: 70844-71138 bp Feature: gene Location: 90938-91585 bp Feature: domain Description: HTH_23 Location: 90968-91079 bp Feature: domain Description: HTH_2 3 Location: 90968-91079 bp Feature: domain Description: InsE Location: 91211-91562 bp Feature: domain Description: InsE Location: 912 11-91562 bp Feature: gene Location: 91863-95957 bp Feature: domain Description: Peptidase_S6 Location: 92016-94200 bp Feature: domain Description: Peptidase_S6 Location: 92 016-942 00 bp Feature: domain Description: autotrans_barl Location: 94734-95955 bp Feature: domain Description: autotrans_barl Location: 94734-95955 bp Feature: gene Location: 96756-98153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97107-97794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97107-97794 bp Feature: domain Description: GIIM Note: maturase Location: 97911-98079 bp Feature: domain Description: GIIM Note: maturase Location: 97911-98079 bp Feature: gene Location: 97993-98544 bp Feature: gene Location: 98590-98781 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 98593-98701 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 98593-98701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT