myRT

myRT report for GCA_900449325.1_39038_E01

Download annotations/find similar RTs

Seq: UGDA01000001.1 (158520 bp)
Overview 1 RT 1: 4189-8026 bp 2 RT 2: 147670-151477 bp Neighborhood of RT #1 [4189, 8049] PHA02517 RVT-GII GIIM DDE_Tnp_IS66 DDE_Tnp_IS66_C Neighborhood of RT #2 [147670, 151500] PHA02517 RVT-GII GIIM RVT-GII DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 4189-4467 bp Feature: gene Location: 4507-4953 bp Feature: domain Description: PHA02517 Location: 4510-4951 bp Feature: domain Description: PHA0251 7 Location: 451 0-4951 bp Feature: gene Location: 5070-6593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5343-6075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5343-6075 bp Feature: domain Description: GIIM Note: maturase Location: 6150-6348 bp Feature: domain Description: GIIM Note: maturase Location: 61 50-6348 bp Feature: gene Location: 6547-7257 bp Feature: gene Location: 7618-8049 bp Feature: domain Description: DDE_Tnp_IS66 Location: 7624-7894 bp Feature: domain Description: DDE_Tnp_IS66 Location: 7624-7894 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 7915-8026 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 791 5-8026 bp Feature: gene Location: 147670-147987 bp Feature: gene Location: 147953-148399 bp Feature: domain Description: PHA02517 Location: 147956-148397 bp Feature: domain Description: PHA0251 7 Location: 1 47956-1 48397 bp Feature: gene Location: 148516-149121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 148528-148603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 48528-1 48603 bp Feature: domain Description: GIIM Note: maturase Location: 148678-148897 bp Feature: domain Description: GIIM Note: maturase Location: 1 48678-1 48897 bp Feature: gene Location: 149270-150025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 149528-149984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 49528-1 49984 bp Feature: gene Location: 150335-150706 bp Feature: gene Location: 151069-151500 bp Feature: domain Description: DDE_Tnp_IS66 Location: 151075-151345 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 51 075-1 51 345 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 151366-151477 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 51 366-1 51 477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)

Seq: UGDA01000003.1 (4948465 bp)
Overview 1 RT 1: 1182511-1186272 bp Neighborhood of RT #1 [1182511, 1186272] autotrans_barl RVT-Retrons DUF932 Feature: gene Location: 1182511-1182999 bp Feature: domain Description: autotrans_barl Location: 1182520-1182997 bp Feature: domain Description: autotrans_barl Location: 1182 52 0-1182 997 bp Feature: gene Location: 1183646-1183909 bp Feature: gene Location: 1184265-1185368 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1184403-1185027 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1184403-118502 7 bp Feature: gene Location: 1185619-1186149 bp Feature: domain Description: DUF932 Location: 1185625-1186114 bp Feature: domain Description: DUF932 Location: 118562 5-1186114 bp Feature: gene Location: 1186120-1186272 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT autotrans_barl (TIGR01414), RVT-Retrons, DUF932 (pfam06067)