myRT

myRT report for GCA_900449575.1_39111_A01

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Seq: UGDH01000001.1 (5013937 bp)
Overview 1 RT 1: 3773951-3780329 bp 2 RT 2: 4291325-4294239 bp Neighborhood of RT #1 [3773951, 3780349] XdhC PBP2_CrgA_like_5 RVT-UG8 PRK09678 Psu Neighborhood of RT #2 [4291325, 4294304] RVT-GII GIIM PHA02517 Feature: gene Location: 3773951-3774907 bp Feature: domain Description: XdhC Location: 3774029-3774884 bp Feature: domain Description: XdhC Location: 3774029-3774884 bp Feature: gene Location: 3774886-3775296 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 3774958-3775270 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 3774958-3775270 bp Feature: gene Location: 3775839-3777857 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3776412-3776865 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 377641 2-3776865 bp Feature: gene Location: 3779520-3779792 bp Feature: domain Description: PRK09678 Location: 3779529-3779694 bp Feature: domain Description: PRK09678 Location: 3779529-3779694 bp Feature: gene Location: 3779798-3780349 bp Feature: domain Description: Psu Location: 3779819-3780329 bp Feature: domain Description: Psu Location: 377981 9-3780329 bp Feature: gene Location: 4291325-4291468 bp Feature: gene Location: 4291493-4291696 bp Feature: gene Location: 4291764-4293287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4292037-4292769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4292037-4292769 bp Feature: domain Description: GIIM Note: maturase Location: 4292844-4293042 bp Feature: domain Description: GIIM Note: maturase Location: 4292844-4293042 bp Feature: gene Location: 4293241-4293666 bp Feature: gene Location: 4293879-4294304 bp Feature: domain Description: PHA02517 Location: 4293903-4294239 bp Feature: domain Description: PHA0251 7 Location: 4293903-4294239 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XdhC (COG1975), PBP2_CrgA_like_5 (cd08474), RVT-UG8, PRK09678 (DNA-binding transcriptional regulator; Provisional), Psu (pfam07455), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: UGDH01000002.1 (134930 bp)
Overview 1 RT 1: 59997-63340 bp Neighborhood of RT #1 [59997, 63340] RVT-GII GIIM HTH_28 Feature: gene Location: 59997-60509 bp Feature: gene Location: 60640-60831 bp Feature: gene Location: 60988-62376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61318-61936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61318-61936 bp Feature: domain Description: GIIM Note: maturase Location: 61984-62215 bp Feature: domain Description: GIIM Note: maturase Location: 61984-62 2 15 bp Feature: gene Location: 62686-62952 bp Feature: domain Description: HTH_28 Location: 62707-62830 bp Feature: domain Description: HTH_2 8 Location: 62 707-62 830 bp Feature: gene Location: 63134-63340 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HTH_28 (pfam13518)