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myRT report for GCA_900450105.1_40105_E02
Download annotations/find similar RTs
Seq:
UGFQ01000002.1 (4593350 bp)
Overview
1
RT 1: 1828899-1832886 bp
2
RT 2: 1894102-1897915 bp
3
RT 3: 2328912-2332521 bp
4
RT 4: 3561552-3564951 bp
5
RT 5: 3594677-3600322 bp
6
RT 6: 3986616-3990085 bp
Neighborhood of RT #1 [1828899, 1832951]
COG3464
PHA02517
RVT-GII
GIIM
PHA02517
Neighborhood of RT #2 [1894102, 1897980]
fliE
PHA02517
RVT-GII
GIIM
PHA02517
Neighborhood of RT #3 [2328912, 2332586]
HTH_Tnp_1
PHA02517
RVT-GII
GIIM
PHA02517
Neighborhood of RT #4 [3561552, 3564951]
PHA02517
RVT-GII
GIIM
PHA02517
Neighborhood of RT #5 [3594677, 3600432]
mhpA
PHA02517
RVT-GII
GIIM
PHA02517
IS285
Neighborhood of RT #6 [3986616, 3990117]
PHA02517
RVT-GII
GIIM
PHA02517
InsE
Feature: gene
Location: 1828899-1829756 bp
Feature: domain
Description: COG3464
Location: 1828908-1829292 bp
Feature: domain
Description: COG3464
Location: 1 828908-1 829292 bp
Feature: gene
Location: 1829863-1830216 bp
Feature: domain
Description: PHA02517
Location: 1829866-1830211 bp
Feature: domain
Description: PHA0251 7
Location: 1 829866-1 83021 1 bp
Feature: gene
Location: 1830411-1831934 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 1830684-1831416 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 1 830684-1 831 41 6 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 1831491-1831689 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 1 831 491 -1 831 689 bp
Feature: gene
Location: 1831888-1832313 bp
Feature: gene
Location: 1832526-1832951 bp
Feature: domain
Description: PHA02517
Location: 1832550-1832886 bp
Feature: domain
Description: PHA0251 7
Location: 1 832550-1 832886 bp
Feature: gene
Location: 1894102-1894422 bp
Feature: domain
Description: fliE
Location: 1894111-1894420 bp
Feature: domain
Description: fliE
Location: 1 8941 1 1 -1 894420 bp
Feature: gene
Location: 1894898-1895332 bp
Feature: domain
Description: PHA02517
Location: 1894901-1895324 bp
Feature: domain
Description: PHA0251 7
Location: 1 894901 -1 895324 bp
Feature: gene
Location: 1895455-1896978 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 1895728-1896460 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 1 895728-1 896460 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 1896535-1896733 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 1 896535-1 896733 bp
Feature: gene
Location: 1896932-1897357 bp
Feature: gene
Location: 1897570-1897980 bp
Feature: domain
Description: PHA02517
Location: 1897576-1897915 bp
Feature: domain
Description: PHA0251 7
Location: 1 897576-1 89791 5 bp
Feature: gene
Location: 2328912-2329175 bp
Feature: domain
Description: HTH_Tnp_1
Location: 2328918-2329122 bp
Feature: domain
Description: HTH_Tnp_1
Location: 232891 8-23291 22 bp
Feature: gene
Location: 2329499-2329852 bp
Feature: domain
Description: PHA02517
Location: 2329502-2329847 bp
Feature: domain
Description: PHA0251 7
Location: 2329502-2329847 bp
Feature: gene
Location: 2330046-2331569 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 2330319-2331051 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 233031 9-2331 051 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 2331126-2331324 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 2331 1 26-2331 324 bp
Feature: gene
Location: 2331523-2331948 bp
Feature: gene
Location: 2332161-2332586 bp
Feature: domain
Description: PHA02517
Location: 2332185-2332521 bp
Feature: domain
Description: PHA0251 7
Location: 23321 85-2332521 bp
Feature: gene
Location: 3561552-3561680 bp
Feature: gene
Location: 3561728-3562009 bp
Feature: domain
Description: PHA02517
Location: 3561734-3561944 bp
Feature: domain
Description: PHA0251 7
Location: 3561 734-3561 944 bp
Feature: gene
Location: 3562601-3564124 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 3562874-3563606 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 3562874-3563606 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 3563681-3563879 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 3563681 -3563879 bp
Feature: gene
Location: 3564301-3564687 bp
Feature: domain
Description: PHA02517
Location: 3564304-3564685 bp
Feature: domain
Description: PHA0251 7
Location: 3564304-3564685 bp
Feature: gene
Location: 3564763-3564951 bp
Feature: gene
Location: 3594677-3596038 bp
Feature: domain
Description: mhpA
Location: 3594683-3596003 bp
Feature: domain
Description: mhpA
Location: 3594683-3596003 bp
Feature: gene
Location: 3596128-3596553 bp
Feature: domain
Description: PHA02517
Location: 3596152-3596488 bp
Feature: domain
Description: PHA0251 7
Location: 35961 52-3596488 bp
Feature: gene
Location: 3597145-3598668 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 3597418-3598150 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 359741 8-35981 50 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 3598225-3598423 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 3598225-3598423 bp
Feature: gene
Location: 3598833-3598997 bp
Feature: domain
Description: PHA02517
Location: 3598836-3598926 bp
Feature: domain
Description: PHA0251 7
Location: 3598836-3598926 bp
Feature: gene
Location: 3599134-3600432 bp
Feature: domain
Description: IS285
Location: 3599164-3600322 bp
Feature: domain
Description: IS285
Location: 35991 64-3600322 bp
Feature: gene
Location: 3986616-3986744 bp
Feature: gene
Location: 3986792-3987073 bp
Feature: domain
Description: PHA02517
Location: 3986798-3987008 bp
Feature: domain
Description: PHA0251 7
Location: 3986798-3987008 bp
Feature: gene
Location: 3987665-3989188 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 3987938-3988670 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 3987938-3988670 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 3988745-3988943 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 3988745-3988943 bp
Feature: gene
Location: 3989365-3989751 bp
Feature: domain
Description: PHA02517
Location: 3989368-3989749 bp
Feature: domain
Description: PHA0251 7
Location: 3989368-3989749 bp
Feature: gene
Location: 3989791-3990117 bp
Feature: domain
Description: InsE
Location: 3989800-3990085 bp
Feature: domain
Description: InsE
Location: 3989800-3990085 bp
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