myRT

myRT report for GCA_900450395.1_40105_E01

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Seq: UGFK01000001.1 (790617 bp)
Overview 1 RT 1: 85421-89450 bp 2 RT 2: 336235-340082 bp Neighborhood of RT #1 [85421, 89452] PRK00299 RVT-GII GIIM PRK11212 PRK11615 Neighborhood of RT #2 [336235, 340087] PHA02517 RVT-GII GIIM InsG YkfC Feature: gene Location: 85421-85666 bp Feature: domain Description: PRK00299 Location: 85424-85661 bp Feature: domain Description: PRK00299 Location: 85424-85661 bp Feature: gene Location: 85820-86206 bp Feature: gene Location: 86500-88023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86773-87505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86773-87505 bp Feature: domain Description: GIIM Note: maturase Location: 87580-87778 bp Feature: domain Description: GIIM Note: maturase Location: 87580-87778 bp Feature: gene Location: 88157-88822 bp Feature: domain Description: PRK11212 Location: 88160-88784 bp Feature: domain Description: PRK1 1 21 2 Location: 881 60-88784 bp Feature: gene Location: 88853-89452 bp Feature: domain Description: PRK11615 Location: 88898-89450 bp Feature: domain Description: PRK1 1 61 5 Location: 88898-89450 bp Feature: gene Location: 336235-336411 bp Feature: gene Location: 336652-337098 bp Feature: domain Description: PHA02517 Location: 336655-337096 bp Feature: domain Description: PHA0251 7 Location: 336655-337096 bp Feature: gene Location: 337215-338561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 337311-338043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33731 1 -338043 bp Feature: domain Description: GIIM Note: maturase Location: 338118-338316 bp Feature: domain Description: GIIM Note: maturase Location: 3381 1 8-33831 6 bp Feature: gene Location: 338607-339881 bp Feature: domain Description: InsG Location: 338610-339651 bp Feature: domain Description: InsG Location: 33861 0-339651 bp Feature: gene Location: 339932-340087 bp Feature: domain Description: YkfC Location: 339941-340082 bp Feature: domain Description: YkfC Location: 339941 -340082 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00299 (sulfurtransferase TusA), RVT-GII, GIIM (pfam08388), PRK11212 (7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter), PRK11615 (hypothetical protein; Provisional), PHA02517 (putative transposase OrfB; Reviewed), InsG (COG3385), YkfC (COG3344)

Seq: UGFK01000002.1 (4460966 bp)
Overview 1 RT 1: 126125-133058 bp 2 RT 2: 854398-858755 bp 3 RT 3: 2362352-2367520 bp 4 RT 4: 3247688-3252227 bp 5 RT 5: 3707181-3710096 bp 6 RT 6: 3882619-3885838 bp Neighborhood of RT #1 [126125, 133058] VI_ClpV1 PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [854398, 858760] InsE PHA02517 RVT-GII GIIM Tra5 YhhI YhhI Neighborhood of RT #3 [2362352, 2367537] MFS_SLC46_TetA_like PHA02517 RVT-GII GIIM PHA02517 HTH_32 Neighborhood of RT #4 [3247688, 3252337] mhpA PHA02517 RVT-GII GIIM PHA02517 PHA02517 Neighborhood of RT #5 [3707181, 3710161] RVT-GII GIIM RVT-GII PHA02517 Neighborhood of RT #6 [3882619, 3885838] PHA02517 RVT-GII GIIM Feature: gene Location: 126125-128674 bp Feature: domain Description: VI_ClpV1 Location: 126161-128621 bp Feature: domain Description: VI_ClpV1 Location: 12 6161-12 862 1 bp Feature: gene Location: 129102-129674 bp Feature: domain Description: PHA02517 Location: 129255-129609 bp Feature: domain Description: PHA02 517 Location: 12 92 55-12 9609 bp Feature: gene Location: 130266-131789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130539-131271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130539-1312 71 bp Feature: domain Description: GIIM Note: maturase Location: 131346-131544 bp Feature: domain Description: GIIM Note: maturase Location: 131346-131544 bp Feature: gene Location: 131966-132352 bp Feature: domain Description: PHA02517 Location: 131969-132350 bp Feature: domain Description: PHA02 517 Location: 131969-132 350 bp Feature: gene Location: 132909-133058 bp Feature: gene Location: 854398-854697 bp Feature: domain Description: InsE Location: 854425-854692 bp Feature: domain Description: InsE Location: 85442 5-854692 bp Feature: gene Location: 854694-855173 bp Feature: domain Description: PHA02517 Location: 854760-855111 bp Feature: domain Description: PHA02 517 Location: 854760-855111 bp Feature: gene Location: 855765-857288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 856038-856770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 856038-856770 bp Feature: domain Description: GIIM Note: maturase Location: 856845-857043 bp Feature: domain Description: GIIM Note: maturase Location: 856845-857043 bp Feature: gene Location: 857411-857830 bp Feature: domain Description: Tra5 Location: 857417-857825 bp Feature: domain Description: Tra5 Location: 857417-85782 5 bp Feature: gene Location: 857999-858760 bp Feature: domain Description: YhhI Location: 858002-858365 bp Feature: domain Description: YhhI Location: 858002 -858365 bp Feature: domain Description: YhhI Location: 858422-858755 bp Feature: domain Description: YhhI Location: 85842 2 -858755 bp Feature: gene Location: 2362352-2363545 bp Feature: domain Description: MFS_SLC46_TetA_like Location: 2362433-2363513 bp Feature: domain Description: MFS_SLC46_TetA_like Location: 2 362 433-2 363513 bp Feature: gene Location: 2364038-2364520 bp Feature: domain Description: PHA02517 Location: 2364101-2364455 bp Feature: domain Description: PHA02 517 Location: 2 364101-2 364455 bp Feature: gene Location: 2365112-2366635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2365385-2366117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 365385-2 366117 bp Feature: domain Description: GIIM Note: maturase Location: 2366192-2366390 bp Feature: domain Description: GIIM Note: maturase Location: 2 366192 -2 366390 bp Feature: gene Location: 2366812-2367198 bp Feature: domain Description: PHA02517 Location: 2366815-2367196 bp Feature: domain Description: PHA02 517 Location: 2 366815-2 367196 bp Feature: gene Location: 2367238-2367537 bp Feature: domain Description: HTH_32 Location: 2367307-2367520 bp Feature: domain Description: HTH_32 Location: 2 367307-2 36752 0 bp Feature: gene Location: 3247688-3249049 bp Feature: domain Description: mhpA Location: 3247694-3249014 bp Feature: domain Description: mhpA Location: 32 47694-32 49014 bp Feature: gene Location: 3249139-3249564 bp Feature: domain Description: PHA02517 Location: 3249163-3249499 bp Feature: domain Description: PHA02 517 Location: 32 49163-32 49499 bp Feature: gene Location: 3250156-3251679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3250429-3251161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 5042 9-32 51161 bp Feature: domain Description: GIIM Note: maturase Location: 3251236-3251434 bp Feature: domain Description: GIIM Note: maturase Location: 32 512 36-32 51434 bp Feature: gene Location: 3251844-3252008 bp Feature: domain Description: PHA02517 Location: 3251847-3251937 bp Feature: domain Description: PHA02 517 Location: 32 51847-32 51937 bp Feature: gene Location: 3252041-3252337 bp Feature: domain Description: PHA02517 Location: 3252044-3252227 bp Feature: domain Description: PHA02 517 Location: 32 52 044-32 52 2 2 7 bp Feature: gene Location: 3707181-3707324 bp Feature: gene Location: 3707349-3707552 bp Feature: gene Location: 3707620-3708453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3707626-3707935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 370762 6-3707935 bp Feature: domain Description: GIIM Note: maturase Location: 3708010-3708229 bp Feature: domain Description: GIIM Note: maturase Location: 3708010-37082 2 9 bp Feature: gene Location: 3708500-3709144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3708773-3709094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3708773-3709094 bp Feature: gene Location: 3709098-3709523 bp Feature: gene Location: 3709736-3710161 bp Feature: domain Description: PHA02517 Location: 3709760-3710096 bp Feature: domain Description: PHA02 517 Location: 3709760-3710096 bp Feature: gene Location: 3882619-3882837 bp Feature: gene Location: 3882843-3883247 bp Feature: domain Description: PHA02517 Location: 3882846-3883236 bp Feature: domain Description: PHA02 517 Location: 3882 846-38832 36 bp Feature: gene Location: 3883412-3884935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3883685-3884417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3883685-3884417 bp Feature: domain Description: GIIM Note: maturase Location: 3884492-3884690 bp Feature: domain Description: GIIM Note: maturase Location: 3884492 -3884690 bp Feature: gene Location: 3885229-3885660 bp Feature: gene Location: 3885671-3885838 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VI_ClpV1 (TIGR03345), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), Tra5 (COG2801), YhhI (COG5433), MFS_SLC46_TetA_like (cd17330), HTH_32 (pfam13565), mhpA (PRK06183)