myRT

myRT report for GCA_900451195.1_48853_F02

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Seq: UGHR01000003.1 (753692 bp)
Overview 1 RT 1: 558268-562560 bp Neighborhood of RT #1 [558268, 562589] gyrB RVT-UG15 nif11_cupin PBP2_DntR_like_3 Feature: gene Location: 558268-558420 bp Ori: STR45044.1 Gene: gyrB_2 Feature: domain Description: gyrB Location: 558271-558418 bp Feature: domain Description: gyrB Location: 558271 -55841 8 bp Feature: gene Location: 558736-559188 bp Feature: gene Location: 559857-561485 bp Ori: STR45046.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 560376-560778 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 560376-560778 bp Feature: gene Location: 561906-562217 bp Ori: STR45047.1 Feature: domain Description: nif11_cupin Location: 561912-562200 bp Feature: domain Description: nif1 1 _cupin Location: 561 91 2-562200 bp Feature: gene Location: 562347-562589 bp Ori: STR45048.1 Gene: syrM1 Feature: domain Description: PBP2_DntR_like_3 Location: 562359-562560 bp Feature: domain Description: PBP2_DntR_like_3 Location: 562359-562560 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT gyrB (TIGR01059), RVT-UG15, nif11_cupin (TIGR03890), PBP2_DntR_like_3 (cd08461)

Seq: UGHR01000001.1 (3322930 bp)
Overview 1 RT 1: 1284268-1289401 bp 2 RT 2: 3058395-3065910 bp Neighborhood of RT #1 [1284268, 1290066] SopE_GEF InsE RVT-GII GIIM COG4584 Neighborhood of RT #2 [3058395, 3065910] PyocinActivator RVT-GII GIIM InsE RVT-Retrons Feature: gene Location: 1284268-1284987 bp Ori: STQ90116.1 Gene: sopE Feature: domain Description: SopE_GEF Location: 1284538-1284943 bp Feature: domain Description: SopE_GEF Location: 12 84538-12 84943 bp Feature: gene Location: 1285118-1285438 bp Ori: STQ90117.1 Feature: domain Description: InsE Location: 1285124-1285418 bp Feature: domain Description: InsE Location: 12 8512 4-12 85418 bp Feature: gene Location: 1286340-1287581 bp Ori: STQ90118.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1286538-1287195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 86538-12 87195 bp Feature: domain Description: GIIM Note: maturase Location: 1287273-1287501 bp Feature: domain Description: GIIM Note: maturase Location: 12 872 73-12 87501 bp Feature: gene Location: 1288212-1288496 bp Feature: gene Location: 1288561-1290066 bp Ori: STQ90120.1 Feature: domain Description: COG4584 Location: 1288615-1289401 bp Feature: domain Description: COG4584 Location: 12 88615-12 89401 bp Feature: gene Location: 3058395-3058580 bp Feature: gene Location: 3058596-3058850 bp Ori: STQ91754.1 Feature: domain Description: PyocinActivator Location: 3058605-3058821 bp Feature: domain Description: PyocinActivator Location: 3058605-305882 1 bp Feature: gene Location: 3059564-3060805 bp Ori: STQ91755.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3059762-3060419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3059762 -3060419 bp Feature: domain Description: GIIM Note: maturase Location: 3060497-3060725 bp Feature: domain Description: GIIM Note: maturase Location: 3060497-306072 5 bp Feature: gene Location: 3061592-3062026 bp Ori: STQ91756.1 Feature: domain Description: InsE Location: 3061598-3061862 bp Feature: domain Description: InsE Location: 3061598-3061862 bp Feature: gene Location: 3062082-3062411 bp Feature: gene Location: 3062567-3062818 bp Feature: gene Location: 3063434-3064510 bp Ori: STQ91759.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3063650-3064202 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3063650-30642 02 bp Feature: gene Location: 3064734-3065141 bp Feature: gene Location: 3065098-3065910 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SopE_GEF (pfam07487), InsE (COG2963), RVT-GII, GIIM (pfam08388), COG4584 (Transposase ), PyocinActivator (pfam11112), RVT-Retrons