myRT

myRT report for GCA_900451395.1_58174_C01

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Seq: UAWM01000013.1 (170830 bp)
Overview 1 RT 1: 135116-139223 bp Neighborhood of RT #1 [135116, 139225] DinI RVT-GII PRK10276 umuC Feature: gene Location: 135116-135358 bp Feature: domain Description: DinI Location: 135167-135347 bp Feature: domain Description: DinI Location: 1 351 67-1 35347 bp Feature: gene Location: 135373-135519 bp Feature: gene Location: 135972-137459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 136377-137067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 36377-1 37067 bp Feature: gene Location: 137538-137957 bp Feature: domain Description: PRK10276 Location: 137541-137952 bp Feature: domain Description: PRK1 0276 Location: 1 37541 -1 37952 bp Feature: gene Location: 137960-139225 bp Feature: domain Description: umuC Location: 137963-139223 bp Feature: domain Description: umuC Location: 1 37963-1 39223 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: UAWM01000005.1 (63113 bp)
Overview 1 RT 1: 2272-7624 bp Neighborhood of RT #1 [2272, 7761] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 2272-3543 bp Feature: domain Description: umuC Location: 2275-3535 bp Feature: domain Description: umuC Location: 2 2 75-3535 bp Feature: gene Location: 3543-4226 bp Feature: domain Description: PRK10276 Location: 3846-4209 bp Feature: domain Description: PRK102 76 Location: 3846-42 09 bp Feature: gene Location: 4380-5867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4785-5475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4785-5475 bp Feature: gene Location: 6113-7087 bp Feature: domain Description: StbA Location: 6119-7064 bp Feature: domain Description: StbA Location: 6119-7064 bp Feature: gene Location: 7090-7761 bp Feature: domain Description: Plasmid_stab_B Location: 7105-7312 bp Feature: domain Description: Plasmid_stab_B Location: 7105-7312 bp Feature: domain Description: Plasmid_stab_B Location: 7417-7624 bp Feature: domain Description: Plasmid_stab_B Location: 7417-762 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: UAWM01000001.1 (2253501 bp)
Overview 1 RT 1: 741054-747922 bp 2 RT 2: 916105-920658 bp Neighborhood of RT #1 [741054, 747924] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Neighborhood of RT #2 [916105, 920658] umuC PRK10276 RVT-GII Feature: gene Location: 741054-741782 bp Feature: domain Description: FimC Location: 741102-741765 bp Feature: domain Description: FimC Location: 741102-741765 bp Feature: gene Location: 741814-744423 bp Feature: domain Description: FimD Location: 741871-744412 bp Feature: domain Description: FimD Location: 741871-744412 bp Feature: gene Location: 744423-746501 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 744831-745275 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 74483 1-745275 bp Feature: gene Location: 746558-746998 bp Feature: domain Description: Integrase_1 Location: 746564-746780 bp Feature: domain Description: Integrase_1 Location: 746564-746780 bp Feature: gene Location: 747259-747924 bp Feature: domain Description: INT_P4_C Location: 747364-747922 bp Feature: domain Description: INT_P4_C Location: 7473 64-747922 bp Feature: gene Location: 916105-917376 bp Feature: domain Description: umuC Location: 916108-917371 bp Feature: domain Description: umuC Location: 916108-9173 71 bp Feature: gene Location: 917376-917801 bp Feature: domain Description: PRK10276 Location: 917379-917787 bp Feature: domain Description: PRK10276 Location: 9173 79-917787 bp Feature: gene Location: 918203-919690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 918608-919298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 918608-919298 bp Feature: gene Location: 919924-920154 bp Feature: gene Location: 920488-920658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII