myRT

myRT report for GCA_900451425.1_45753_B01

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Seq: UGKM01000001.1 (2048405 bp)
Overview 1 RT 1: 136351-141655 bp 2 RT 2: 1995603-2000949 bp 3 RT 3: 2030353-2034658 bp Neighborhood of RT #1 [136351, 141657] PRK15021 PRK15134 RVT_N RVT-GII GIIM HNHc PRK15134 PRK11835 Neighborhood of RT #2 [1995603, 2001056] hxl6Piso_put sgaE RVT_N RVT-GII GIIM HNHc IS285 IS285 Neighborhood of RT #3 [2030353, 2034669] RVT_N RVT-GII GIIM HNHc IS285 Feature: gene Location: 136351-137376 bp Feature: domain Description: PRK15021 Location: 136354-137374 bp Feature: domain Description: PRK1 5021 Location: 1 36354-1 37374 bp Feature: gene Location: 137378-137710 bp Feature: domain Description: PRK15134 Location: 137381-137693 bp Feature: domain Description: PRK1 51 34 Location: 1 37381 -1 37693 bp Feature: gene Location: 138283-139950 bp Feature: domain Description: RVT_N Location: 138331-138568 bp Feature: domain Description: RVT_N Location: 1 38331 -1 38568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138619-139261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3861 9-1 39261 bp Feature: domain Description: GIIM Note: maturase Location: 139312-139546 bp Feature: domain Description: GIIM Note: maturase Location: 1 3931 2-1 39546 bp Feature: domain Description: HNHc Note: nucleases Location: 139756-139915 bp Feature: domain Description: HNHc Note: nucleases Location: 1 39756-1 3991 5 bp Feature: gene Location: 140014-141309 bp Feature: domain Description: PRK15134 Location: 140032-141307 bp Feature: domain Description: PRK1 51 34 Location: 1 40032-1 41 307 bp Feature: gene Location: 141313-141657 bp Feature: domain Description: PRK11835 Location: 141316-141655 bp Feature: domain Description: PRK1 1 835 Location: 1 41 31 6-1 41 655 bp Feature: gene Location: 1995603-1996457 bp Feature: domain Description: hxl6Piso_put Location: 1995618-1996446 bp Feature: domain Description: hxl6Piso_put Location: 1 99561 8-1 996446 bp Feature: gene Location: 1996457-1997143 bp Feature: domain Description: sgaE Location: 1996460-1997141 bp Feature: domain Description: sgaE Location: 1 996460-1 9971 41 bp Feature: gene Location: 1997902-1999569 bp Feature: domain Description: RVT_N Location: 1997950-1998187 bp Feature: domain Description: RVT_N Location: 1 997950-1 9981 87 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1998238-1998880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 998238-1 998880 bp Feature: domain Description: GIIM Note: maturase Location: 1998931-1999165 bp Feature: domain Description: GIIM Note: maturase Location: 1 998931 -1 9991 65 bp Feature: domain Description: HNHc Note: nucleases Location: 1999375-1999534 bp Feature: domain Description: HNHc Note: nucleases Location: 1 999375-1 999534 bp Feature: gene Location: 1999870-2000379 bp Feature: domain Description: IS285 Location: 1999900-2000329 bp Feature: domain Description: IS285 Location: 1 999900-2000329 bp Feature: gene Location: 2000319-2001056 bp Feature: domain Description: IS285 Location: 2000325-2000949 bp Feature: domain Description: IS285 Location: 2000325-2000949 bp Feature: gene Location: 2030353-2030589 bp Feature: gene Location: 2030658-2030918 bp Feature: gene Location: 2031491-2033158 bp Feature: domain Description: RVT_N Location: 2031539-2031776 bp Feature: domain Description: RVT_N Location: 2031 539-2031 776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2031827-2032469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2031 827-2032469 bp Feature: domain Description: GIIM Note: maturase Location: 2032520-2032754 bp Feature: domain Description: GIIM Note: maturase Location: 2032520-2032754 bp Feature: domain Description: HNHc Note: nucleases Location: 2032964-2033123 bp Feature: domain Description: HNHc Note: nucleases Location: 2032964-20331 23 bp Feature: gene Location: 2033272-2033400 bp Feature: gene Location: 2033461-2034669 bp Feature: domain Description: IS285 Location: 2033491-2034658 bp Feature: domain Description: IS285 Location: 2033491 -2034658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UGKM01000002.1 (73254 bp)
Overview 1 RT 1: 2-1172 bp 2 RT 2: 27852-30983 bp 3 RT 3: 59953-64424 bp Neighborhood of RT #1 [2, 1288] RVT-GII PRK10276 Neighborhood of RT #2 [27852, 30983] HTH_XRE RVT_N RVT-GII GIIM Neighborhood of RT #3 [59953, 64429] DDE_Tnp_ISL3 RVT-GII PRK10276 umuC Feature: gene Location: 2-613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-410 bp Feature: gene Location: 690-878 bp Feature: gene Location: 884-1288 bp Feature: domain Description: PRK10276 Location: 893-1172 bp Feature: domain Description: PRK102 76 Location: 893-1172 bp Feature: gene Location: 27852-28130 bp Feature: domain Description: HTH_XRE Location: 27954-28113 bp Feature: domain Description: HTH_XRE Location: 2 7954-2 8113 bp Feature: gene Location: 28131-28295 bp Feature: gene Location: 28583-30088 bp Feature: domain Description: RVT_N Location: 28631-28868 bp Feature: domain Description: RVT_N Location: 2 8631-2 8868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28919-29561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 8919-2 9561 bp Feature: domain Description: GIIM Note: maturase Location: 29612-29846 bp Feature: domain Description: GIIM Note: maturase Location: 2 9612 -2 9846 bp Feature: gene Location: 30207-30503 bp Feature: gene Location: 30807-30983 bp Feature: gene Location: 59953-60765 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 60016-60727 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 60016-6072 7 bp Feature: gene Location: 60885-61118 bp Feature: gene Location: 61169-62656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61574-62264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61574-62 2 64 bp Feature: gene Location: 62733-63158 bp Feature: domain Description: PRK10276 Location: 62742-63144 bp Feature: domain Description: PRK102 76 Location: 62 742 -63144 bp Feature: gene Location: 63158-64429 bp Feature: domain Description: umuC Location: 63161-64424 bp Feature: domain Description: umuC Location: 63161-6442 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UGKM01000008.1 (129485 bp)
Overview 1 RT 1: 114920-120688 bp Neighborhood of RT #1 [114920, 120702] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII Cloacin E2R135 Cytotoxic Cloacin_immun Feature: gene Location: 114920-116458 bp Feature: domain Description: LZ_Tnp_IS66 Location: 115040-115250 bp Feature: domain Description: LZ_Tnp_IS66 Location: 115040-115250 bp Feature: domain Description: zf-IS66 Location: 115277-115403 bp Feature: domain Description: zf-IS66 Location: 115277-115403 bp Feature: domain Description: DDE_Tnp_IS66 Location: 115448-116303 bp Feature: domain Description: DDE_Tnp_IS66 Location: 115448-1163 03 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 116324-116435 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1163 24-11643 5 bp Feature: gene Location: 116871-117104 bp Feature: gene Location: 117155-118642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117560-118250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117560-118250 bp Feature: gene Location: 118747-120435 bp Feature: domain Description: Cloacin Location: 118876-119704 bp Feature: domain Description: Cloacin Location: 118876-119704 bp Feature: domain Description: E2R135 Location: 119713-120118 bp Feature: domain Description: E2R13 5 Location: 119713 -120118 bp Feature: domain Description: Cytotoxic Location: 120172-120424 bp Feature: domain Description: Cytotoxic Location: 120172-120424 bp Feature: gene Location: 120445-120702 bp Feature: domain Description: Cloacin_immun Location: 120451-120688 bp Feature: domain Description: Cloacin_immun Location: 120451-120688 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UGKM01000007.1 (2994238 bp)
Overview 1 RT 1: 37615-41577 bp 2 RT 2: 1094045-1097999 bp 3 RT 3: 1170817-1175598 bp 4 RT 4: 1306302-1309531 bp 5 RT 5: 1397011-1402333 bp 6 RT 6: 2368044-2373020 bp 7 RT 7: 2853614-2857974 bp 8 RT 8: 2966404-2972302 bp Neighborhood of RT #1 [37615, 41582] dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [1094045, 1098010] PRK10598 PRK05451 RVT-GII PRK10597 Neighborhood of RT #3 [1170817, 1175603] TfoX_N TfoX_C RVT-GII sula PRK10808 Neighborhood of RT #4 [1306302, 1310031] Zn_Tnp_IS1 HTH_Tnp_IS1 DDE_Tnp_IS1 RVT-GII Phage_GPA Neighborhood of RT #5 [1397011, 1402374] UvrB RVT-GII LivF Neighborhood of RT #6 [2368044, 2373020] DUF5405 Phage_GPA RVT-GII Neighborhood of RT #7 [2853614, 2857974] mltC RVT-GII GIIM HNHc RVT_N Neighborhood of RT #8 [2966404, 2972337] RVT_N RVT-GII GIIM HNHc DUF932 Feature: gene Location: 37615-38784 bp Feature: domain Description: dacD Location: 37624-38779 bp Feature: domain Description: dacD Location: 37624 -38779 bp Feature: gene Location: 39017-39250 bp Feature: gene Location: 39304-40788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39706-40396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39706-4 0396 bp Feature: gene Location: 40870-41343 bp Feature: domain Description: PRK10016 Location: 40873-41332 bp Feature: domain Description: PRK10016 Location: 4 0873-4 1332 bp Feature: gene Location: 41427-41582 bp Feature: domain Description: YccC Location: 41448-41577 bp Feature: domain Description: YccC Location: 4 14 4 8-4 1577 bp Feature: gene Location: 1094045-1094605 bp Feature: domain Description: PRK10598 Location: 1094048-1094603 bp Feature: domain Description: PRK10598 Location: 1094 04 8-1094 603 bp Feature: gene Location: 1094731-1095777 bp Feature: domain Description: PRK05451 Location: 1094746-1095772 bp Feature: domain Description: PRK054 51 Location: 1094 74 6-1095772 bp Feature: gene Location: 1095870-1097354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1096272-1096962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1096272-1096962 bp Feature: gene Location: 1097408-1097641 bp Feature: gene Location: 1097759-1098010 bp Feature: domain Description: PRK10597 Location: 1097762-1097999 bp Feature: domain Description: PRK10597 Location: 1097762-1097999 bp Feature: gene Location: 1170817-1171434 bp Feature: domain Description: TfoX_N Location: 1170886-1171153 bp Feature: domain Description: TfoX_N Location: 1170886-1171153 bp Feature: domain Description: TfoX_C Location: 1171189-1171420 bp Feature: domain Description: TfoX_C Location: 1171189-11714 20 bp Feature: gene Location: 1171821-1172054 bp Feature: gene Location: 1172108-1173592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1172510-1173200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1172510-1173200 bp Feature: gene Location: 1173671-1174180 bp Feature: domain Description: sula Location: 1173677-1174178 bp Feature: domain Description: sula Location: 1173677-1174 178 bp Feature: gene Location: 1174533-1175603 bp Feature: domain Description: PRK10808 Location: 1174536-1175598 bp Feature: domain Description: PRK10808 Location: 1174 536-1175598 bp Feature: gene Location: 1306302-1306526 bp Feature: domain Description: Zn_Tnp_IS1 Location: 1306308-1306359 bp Feature: domain Description: Zn_Tnp_IS1 Location: 1306308-1306359 bp Feature: domain Description: HTH_Tnp_IS1 Location: 1306380-1306515 bp Feature: domain Description: HTH_Tnp_IS1 Location: 1306380-1306515 bp Feature: gene Location: 1306571-1306948 bp Feature: domain Description: DDE_Tnp_IS1 Location: 1306574-1306946 bp Feature: domain Description: DDE_Tnp_IS1 Location: 1306574 -130694 6 bp Feature: gene Location: 1307165-1308649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1307567-1308257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1307567-1308257 bp Feature: gene Location: 1308703-1308936 bp Feature: gene Location: 1309387-1310031 bp Feature: domain Description: Phage_GPA Location: 1309396-1309531 bp Feature: domain Description: Phage_GPA Location: 1309396-1309531 bp Feature: gene Location: 1397011-1399032 bp Feature: domain Description: UvrB Location: 1397017-1399018 bp Feature: domain Description: UvrB Location: 1397017-1399018 bp Feature: gene Location: 1399206-1399439 bp Feature: gene Location: 1399493-1400977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1399895-1400585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1399895-14 00585 bp Feature: gene Location: 1401353-1401565 bp Feature: gene Location: 1401652-1402374 bp Feature: domain Description: LivF Location: 1401655-1402333 bp Feature: domain Description: LivF Location: 14 01655-14 02333 bp Feature: gene Location: 2368044-2368316 bp Feature: domain Description: DUF5405 Location: 2368062-2368305 bp Feature: domain Description: DUF54 05 Location: 2368062-2368305 bp Feature: gene Location: 2368585-2370807 bp Feature: domain Description: Phage_GPA Location: 2369008-2369950 bp Feature: domain Description: Phage_GPA Location: 2369008-2369950 bp Feature: gene Location: 2370948-2372432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2371350-2372040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2371350-237204 0 bp Feature: gene Location: 2372486-2372719 bp Feature: gene Location: 2372838-2373020 bp Feature: gene Location: 2853614-2854699 bp Feature: domain Description: mltC Location: 2853620-2854694 bp Feature: domain Description: mltC Location: 2853620-2854 694 bp Feature: gene Location: 2854852-2855118 bp Feature: gene Location: 2855385-2856659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2855388-2855970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2855388-2855970 bp Feature: domain Description: GIIM Note: maturase Location: 2856021-2856255 bp Feature: domain Description: GIIM Note: maturase Location: 2856021-2856255 bp Feature: domain Description: HNHc Note: nucleases Location: 2856465-2856624 bp Feature: domain Description: HNHc Note: nucleases Location: 28564 65-2856624 bp Feature: gene Location: 2856607-2857053 bp Feature: domain Description: RVT_N Location: 2856655-2856871 bp Feature: domain Description: RVT_N Location: 2856655-2856871 bp Feature: gene Location: 2857771-2857974 bp Feature: gene Location: 2966404-2966640 bp Feature: gene Location: 2968298-2968522 bp Feature: gene Location: 2968888-2970555 bp Feature: domain Description: RVT_N Location: 2968936-2969173 bp Feature: domain Description: RVT_N Location: 2968936-2969173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2969224-2969866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2969224 -2969866 bp Feature: domain Description: GIIM Note: maturase Location: 2969917-2970151 bp Feature: domain Description: GIIM Note: maturase Location: 2969917-2970151 bp Feature: domain Description: HNHc Note: nucleases Location: 2970361-2970520 bp Feature: domain Description: HNHc Note: nucleases Location: 2970361-2970520 bp Feature: gene Location: 2971273-2971476 bp Feature: gene Location: 2971516-2972337 bp Feature: domain Description: DUF932 Location: 2971624-2972302 bp Feature: domain Description: DUF932 Location: 2971624 -2972302 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT