myRT

myRT report for GCA_900451495.1_44787_D01

Download annotations/find similar RTs

Seq: UGKA01000003.1 (103700 bp)
Overview 1 RT 1: 18944-23334 bp Neighborhood of RT #1 [18944, 23334] HTH_LUXR RVT_N RVT-GII GIIM HNHc Feature: gene Location: 18944-19135 bp Feature: domain Description: HTH_LUXR Location: 18950-19091 bp Feature: domain Description: HTH_LUXR Location: 1 8950-1 9091 bp Feature: gene Location: 20182-20406 bp Feature: gene Location: 20772-22439 bp Feature: domain Description: RVT_N Location: 20820-21057 bp Feature: domain Description: RVT_N Location: 20820-21 057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21108-21750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 1 08-21 750 bp Feature: domain Description: GIIM Note: maturase Location: 21801-22035 bp Feature: domain Description: GIIM Note: maturase Location: 21 801 -22035 bp Feature: domain Description: HNHc Note: nucleases Location: 22245-22404 bp Feature: domain Description: HNHc Note: nucleases Location: 22245-22404 bp Feature: gene Location: 22558-22854 bp Feature: gene Location: 23158-23334 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UGKA01000001.1 (59103 bp)
Overview 1 RT 1: 16038-21195 bp Neighborhood of RT #1 [16038, 21209] zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 RVT-GII Cloacin E2R135 Cytotoxic Cloacin_immun Feature: gene Location: 16038-17258 bp Feature: domain Description: zf-ISL3 Location: 16170-16296 bp Feature: domain Description: zf-ISL3 Location: 16170-162 96 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 16314-16461 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 16314-16461 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 16509-17220 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 16509-172 2 0 bp Feature: gene Location: 17378-17611 bp Feature: gene Location: 17662-19149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18067-18757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18067-18757 bp Feature: gene Location: 19254-20942 bp Feature: domain Description: Cloacin Location: 19383-20211 bp Feature: domain Description: Cloacin Location: 19383-2 02 11 bp Feature: domain Description: E2R135 Location: 20220-20625 bp Feature: domain Description: E2 R135 Location: 2 02 2 0-2 062 5 bp Feature: domain Description: Cytotoxic Location: 20679-20931 bp Feature: domain Description: Cytotoxic Location: 2 0679-2 0931 bp Feature: gene Location: 20952-21209 bp Feature: domain Description: Cloacin_immun Location: 20958-21195 bp Feature: domain Description: Cloacin_immun Location: 2 0958-2 1195 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UGKA01000005.1 (5226701 bp)
Overview 1 RT 1: 1657739-1662734 bp 2 RT 2: 1747149-1751050 bp 3 RT 3: 1988858-1992821 bp 4 RT 4: 3361784-3366609 bp 5 RT 5: 3693336-3696739 bp 6 RT 6: 3858555-3861591 bp Neighborhood of RT #1 [1657739, 1662748] RVT-GII UvrB Neighborhood of RT #2 [1747149, 1751079] Phage_GPA RVT-GII DNA_pack_C Neighborhood of RT #3 [1988858, 1992823] PRK10597 RVT-GII PRK05451 PRK10598 Neighborhood of RT #4 [3361784, 3366647] YccC PRK10016 RVT-GII zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 Neighborhood of RT #5 [3693336, 3697407] RVT-GII BNR_2 Neighborhood of RT #6 [3858555, 3861591] Terminase_2 RVT-GII Feature: gene Location: 1657739-1658038 bp Feature: gene Location: 1658194-1658406 bp Feature: gene Location: 1658782-1660266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1659184-1659874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1659184-1659874 bp Feature: gene Location: 1660320-1660553 bp Feature: gene Location: 1660727-1662748 bp Feature: domain Description: UvrB Location: 1660733-1662734 bp Feature: domain Description: UvrB Location: 166073 3 -166273 4 bp Feature: gene Location: 1747149-1747793 bp Feature: domain Description: Phage_GPA Location: 1747158-1747293 bp Feature: domain Description: Phage_GPA Location: 1747158-1747293 bp Feature: gene Location: 1748244-1748477 bp Feature: gene Location: 1748531-1750015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1748933-1749623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 174893 3 -1749623 bp Feature: gene Location: 1750104-1750292 bp Feature: gene Location: 1750615-1751079 bp Feature: domain Description: DNA_pack_C Location: 1750732-1751050 bp Feature: domain Description: DNA_pack_C Location: 175073 2-1751050 bp Feature: gene Location: 1988858-1989109 bp Feature: domain Description: PRK10597 Location: 1988861-1989098 bp Feature: domain Description: PRK10597 Location: 1988861-1989098 bp Feature: gene Location: 1989227-1989460 bp Feature: gene Location: 1989514-1990998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1989916-1990606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1989916-1990606 bp Feature: gene Location: 1991091-1992137 bp Feature: domain Description: PRK05451 Location: 1991106-1992132 bp Feature: domain Description: PRK05451 Location: 1991106-199213 2 bp Feature: gene Location: 1992263-1992823 bp Feature: domain Description: PRK10598 Location: 1992266-1992821 bp Feature: domain Description: PRK10598 Location: 1992266-1992821 bp Feature: gene Location: 3361784-3362842 bp Feature: domain Description: YccC Location: 3361790-3362828 bp Feature: domain Description: YccC Location: 3 3 61790-3 3 62828 bp Feature: gene Location: 3362941-3363414 bp Feature: domain Description: PRK10016 Location: 3362944-3363403 bp Feature: domain Description: PRK10016 Location: 3 3 62944-3 3 63 403 bp Feature: gene Location: 3363496-3364980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3363898-3364588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 63 898-3 3 64588 bp Feature: gene Location: 3365034-3365267 bp Feature: gene Location: 3365427-3366647 bp Feature: domain Description: zf-ISL3 Location: 3365559-3365685 bp Feature: domain Description: zf-ISL3 Location: 3 3 65559-3 3 65685 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 3365703-3365847 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 3 3 65703 -3 3 65847 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 3365898-3366609 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 3 3 65898-3 3 66609 bp Feature: gene Location: 3693336-3693470 bp Feature: gene Location: 3693662-3693901 bp Feature: gene Location: 3693980-3694777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3694004-3694385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 694004-3 6943 85 bp Feature: gene Location: 3694793-3695560 bp Feature: gene Location: 3695560-3697407 bp Feature: domain Description: BNR_2 Location: 3696391-3696739 bp Feature: domain Description: BNR_2 Location: 3 6963 91-3 69673 9 bp Feature: gene Location: 3858555-3859139 bp Feature: domain Description: Terminase_2 Location: 3858600-3859065 bp Feature: domain Description: Terminase_2 Location: 3 858600-3 859065 bp Feature: gene Location: 3859197-3859526 bp Feature: gene Location: 3859872-3860846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3859881-3860454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 859881-3 860454 bp Feature: gene Location: 3860943-3861281 bp Feature: gene Location: 3861274-3861591 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT