myRT

myRT report for GCA_900451685.1_37554_B01

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Seq: UGLE01000002.1 (205552 bp)
Overview 1 RT 1: 47478-51868 bp 2 RT 2: 82736-87668 bp Neighborhood of RT #1 [47478, 51868] HTH_LUXR RVT_N RVT-GII GIIM HNHc Neighborhood of RT #2 [82736, 87679] zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 RVT-GII Cloacin Cloacin E2R135 Cytotoxic Feature: gene Location: 47478-47669 bp Feature: domain Description: HTH_LUXR Location: 47484-47625 bp Feature: domain Description: HTH_LUXR Location: 47484-47625 bp Feature: gene Location: 48716-48940 bp Feature: gene Location: 49306-50973 bp Feature: domain Description: RVT_N Location: 49354-49591 bp Feature: domain Description: RVT_N Location: 49354-49591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49642-50284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49642-50284 bp Feature: domain Description: GIIM Note: maturase Location: 50335-50569 bp Feature: domain Description: GIIM Note: maturase Location: 50335-50569 bp Feature: domain Description: HNHc Note: nucleases Location: 50779-50938 bp Feature: domain Description: HNHc Note: nucleases Location: 50779-50938 bp Feature: gene Location: 51092-51388 bp Feature: gene Location: 51692-51868 bp Feature: gene Location: 82736-83956 bp Feature: domain Description: zf-ISL3 Location: 82868-82994 bp Feature: domain Description: zf-ISL3 Location: 82868-82994 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 83012-83159 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 8301 2-831 59 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 83207-83918 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 83207-8391 8 bp Feature: gene Location: 84116-84349 bp Feature: gene Location: 84400-85887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84805-85495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84805-85495 bp Feature: gene Location: 85992-86714 bp Feature: domain Description: Cloacin Location: 86112-86637 bp Feature: domain Description: Cloacin Location: 861 1 2-86637 bp Feature: gene Location: 86867-87679 bp Feature: domain Description: Cloacin Location: 86870-86948 bp Feature: domain Description: Cloacin Location: 86870-86948 bp Feature: domain Description: E2R135 Location: 86957-87362 bp Feature: domain Description: E2R1 35 Location: 86957-87362 bp Feature: domain Description: Cytotoxic Location: 87416-87668 bp Feature: domain Description: Cytotoxic Location: 8741 6-87668 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UGLE01000003.1 (208806 bp)
Overview 1 RT 1: 14148-19067 bp Neighborhood of RT #1 [14148, 19072] zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 RVT-GII PRK10276 umuC Feature: gene Location: 14148-15368 bp Feature: domain Description: zf-ISL3 Location: 14280-14406 bp Feature: domain Description: zf-ISL3 Location: 142 80-14406 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 14424-14571 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 1442 4-14571 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 14619-15330 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 14619-15330 bp Feature: gene Location: 15528-15761 bp Feature: gene Location: 15812-17299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16217-16907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162 17-16907 bp Feature: gene Location: 17376-17801 bp Feature: domain Description: PRK10276 Location: 17385-17787 bp Feature: domain Description: PRK102 76 Location: 17385-17787 bp Feature: gene Location: 17801-19072 bp Feature: domain Description: umuC Location: 17804-19067 bp Feature: domain Description: umuC Location: 17804-19067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UGLE01000004.1 (5003190 bp)
Overview 1 RT 1: 1595454-1599994 bp 2 RT 2: 1685960-1689863 bp 3 RT 3: 2791146-2796770 bp 4 RT 4: 3163462-3168287 bp 5 RT 5: 3465598-3470024 bp Neighborhood of RT #1 [1595454, 1600008] RVT-GII UvrB Neighborhood of RT #2 [1685960, 1689892] Phage_GPA RVT-GII DNA_pack_C Neighborhood of RT #3 [2791146, 2796793] DDE_Tnp_IS1 IS285 RVT-GII Tra5 Neighborhood of RT #4 [3163462, 3168325] YccC PRK10016 RVT-GII zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 Neighborhood of RT #5 [3465598, 3470044] MFS_ExuT_GudP_like PRK15440 RVT-GII PRK15440 Feature: gene Location: 1595454-1595666 bp Feature: gene Location: 1595697-1595846 bp Feature: gene Location: 1596043-1597527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1596445-1597135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1596445-159713 5 bp Feature: gene Location: 1597581-1597901 bp Feature: gene Location: 1597987-1600008 bp Feature: domain Description: UvrB Location: 1597993-1599994 bp Feature: domain Description: UvrB Location: 1597993 -1599994 bp Feature: gene Location: 1685960-1686604 bp Feature: domain Description: Phage_GPA Location: 1685969-1686104 bp Feature: domain Description: Phage_GPA Location: 1685969-1686104 bp Feature: gene Location: 1687057-1687290 bp Feature: gene Location: 1687344-1688828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1687746-1688436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1687746-168843 6 bp Feature: gene Location: 1688917-1689105 bp Feature: gene Location: 1689428-1689892 bp Feature: domain Description: DNA_pack_C Location: 1689545-1689863 bp Feature: domain Description: DNA_pack_C Location: 1689545-1689863 bp Feature: gene Location: 2791146-2791541 bp Feature: domain Description: DDE_Tnp_IS1 Location: 2791152-2791539 bp Feature: domain Description: DDE_Tnp_IS1 Location: 2791152-279153 9 bp Feature: gene Location: 2791638-2792846 bp Feature: domain Description: IS285 Location: 2791668-2792835 bp Feature: domain Description: IS285 Location: 2791668-279283 5 bp Feature: gene Location: 2793787-2795271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2794189-2794879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2794189-2794879 bp Feature: gene Location: 2795325-2795558 bp Feature: gene Location: 2796041-2796793 bp Feature: domain Description: Tra5 Location: 2796071-2796770 bp Feature: domain Description: Tra5 Location: 2796071-2796770 bp Feature: gene Location: 3163462-3164520 bp Feature: domain Description: YccC Location: 3163468-3164506 bp Feature: domain Description: YccC Location: 3 163 468-3 164506 bp Feature: gene Location: 3164619-3165092 bp Feature: domain Description: PRK10016 Location: 3164622-3165081 bp Feature: domain Description: PRK10016 Location: 3 164622-3 165081 bp Feature: gene Location: 3165174-3166658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3165576-3166266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 165576-3 166266 bp Feature: gene Location: 3166712-3166945 bp Feature: gene Location: 3167105-3168325 bp Feature: domain Description: zf-ISL3 Location: 3167237-3167363 bp Feature: domain Description: zf-ISL3 Location: 3 16723 7-3 1673 63 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 3167381-3167528 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 3 1673 81-3 167528 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 3167576-3168287 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 3 167576-3 168287 bp Feature: gene Location: 3465598-3466890 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 3465643-3466840 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 3 465643 -3 466840 bp Feature: gene Location: 3466930-3467952 bp Feature: domain Description: PRK15440 Location: 3466936-3467950 bp Feature: domain Description: PRK15440 Location: 3 46693 6-3 467950 bp Feature: gene Location: 3468043-3469527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3468445-3469135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 468445-3 46913 5 bp Feature: gene Location: 3469581-3469814 bp Feature: gene Location: 3469874-3470044 bp Feature: domain Description: PRK15440 Location: 3469877-3470024 bp Feature: domain Description: PRK15440 Location: 3 469877-3 470024 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT