myRT

myRT report for GCA_900451735.1_40295_H02

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Seq: UGLS01000002.1 (72528 bp)
Overview 1 RT 1: 8262-12549 bp Neighborhood of RT #1 [8262, 12549] HsdM RVT_N RVT-GII GIIM HNHc Feature: gene Location: 8262-8525 bp Feature: gene Location: 8568-9353 bp Feature: domain Description: HsdM Location: 8916-9273 bp Feature: domain Description: HsdM Location: 891 6-9273 bp Feature: gene Location: 9691-11358 bp Feature: domain Description: RVT_N Location: 9739-9976 bp Feature: domain Description: RVT_N Location: 9739-9976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10027-10669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0027-1 0669 bp Feature: domain Description: GIIM Note: maturase Location: 10720-10954 bp Feature: domain Description: GIIM Note: maturase Location: 1 0720-1 0954 bp Feature: domain Description: HNHc Note: nucleases Location: 11164-11323 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 1 64-1 1 323 bp Feature: gene Location: 11477-11773 bp Feature: gene Location: 12106-12549 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UGLS01000003.1 (165299 bp)
Overview 1 RT 1: 22981-27076 bp 2 RT 2: 140373-144483 bp Neighborhood of RT #1 [22981, 27076] umuC PRK10276 RVT-GII Neighborhood of RT #2 [140373, 144483] Cloacin_immun Cloacin E2R135 Cytotoxic RVT-GII Feature: gene Location: 22981-24252 bp Feature: domain Description: umuC Location: 22984-24247 bp Feature: domain Description: umuC Location: 2 2 984-2 42 47 bp Feature: gene Location: 24252-24677 bp Feature: domain Description: PRK10276 Location: 24261-24663 bp Feature: domain Description: PRK102 76 Location: 2 42 61-2 4663 bp Feature: gene Location: 24754-26241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25159-25849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5159-2 5849 bp Feature: gene Location: 26292-26525 bp Feature: gene Location: 26852-27076 bp Feature: gene Location: 140373-140630 bp Feature: domain Description: Cloacin_immun Location: 140379-140616 bp Feature: domain Description: Cloacin_immun Location: 140379-140616 bp Feature: gene Location: 140640-142328 bp Feature: domain Description: Cloacin Location: 140769-141597 bp Feature: domain Description: Cloacin Location: 140769-141597 bp Feature: domain Description: E2R135 Location: 141606-142011 bp Feature: domain Description: E2 R135 Location: 141606-142 011 bp Feature: domain Description: Cytotoxic Location: 142065-142317 bp Feature: domain Description: Cytotoxic Location: 142 065-142 317 bp Feature: gene Location: 142433-143920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142838-143528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142 838-14352 8 bp Feature: gene Location: 143971-144204 bp Feature: gene Location: 144343-144483 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UGLS01000005.1 (1022706 bp)
Overview 1 RT 1: 985798-988444 bp Neighborhood of RT #1 [985798, 988944] RVT-GII Phage_GPA Feature: gene Location: 985798-985986 bp Feature: gene Location: 986007-986189 bp Feature: gene Location: 986447-987565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 986852-987464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 986852-987464 bp Feature: gene Location: 987616-987849 bp Feature: gene Location: 988300-988944 bp Feature: domain Description: Phage_GPA Location: 988309-988444 bp Feature: domain Description: Phage_GPA Location: 9883 09-988444 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UGLS01000006.1 (765034 bp)
Overview 1 RT 1: 442923-447795 bp Neighborhood of RT #1 [442923, 447809] dacD RVT-GII PRK10016 YccC Feature: gene Location: 442923-444092 bp Feature: domain Description: dacD Location: 442932-444087 bp Feature: domain Description: dacD Location: 4 4 2932-4 4 4 087 bp Feature: gene Location: 444326-444559 bp Feature: gene Location: 444610-446097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 445015-445705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 4 5015-4 4 5705 bp Feature: gene Location: 446179-446652 bp Feature: domain Description: PRK10016 Location: 446182-446641 bp Feature: domain Description: PRK10016 Location: 4 4 6182-4 4 664 1 bp Feature: gene Location: 446736-447809 bp Feature: domain Description: YccC Location: 446757-447795 bp Feature: domain Description: YccC Location: 4 4 6757-4 4 7795 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UGLS01000007.1 (3044325 bp)
Overview 1 RT 1: 2742978-2747973 bp Neighborhood of RT #1 [2742978, 2747987] RVT-GII UvrB Feature: gene Location: 2742978-2743277 bp Feature: gene Location: 2743433-2743645 bp Feature: gene Location: 2744021-2745505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2744423-2745113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2744423-2745 113 bp Feature: gene Location: 2745559-2745792 bp Feature: gene Location: 2745966-2747987 bp Feature: domain Description: UvrB Location: 2745972-2747973 bp Feature: domain Description: UvrB Location: 2745 972-2747973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT