myRT

myRT report for GCA_900451765.1_38977_D01

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Seq: UGLJ01000004.1 (75986 bp)
Overview 1 RT 1: 13180-20225 bp 2 RT 2: 63587-68054 bp Neighborhood of RT #1 [13180, 20225] umuC PRK10276 RVT-GII RVT_N RVT-GII GIIM HNHc Neighborhood of RT #2 [63587, 68068] RVT-GII Cloacin E2R135 Cytotoxic Cloacin_immun Feature: gene Location: 13180-14451 bp Feature: domain Description: umuC Location: 13183-14446 bp Feature: domain Description: umuC Location: 1 31 83-1 4446 bp Feature: gene Location: 14451-14876 bp Feature: domain Description: PRK10276 Location: 14460-14862 bp Feature: domain Description: PRK1 0276 Location: 1 4460-1 4862 bp Feature: gene Location: 14953-16440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15358-16048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5358-1 6048 bp Feature: gene Location: 16491-16724 bp Feature: gene Location: 17051-17275 bp Feature: gene Location: 17641-19308 bp Feature: domain Description: RVT_N Location: 17689-17926 bp Feature: domain Description: RVT_N Location: 1 7689-1 7926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17977-18619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7977-1 861 9 bp Feature: domain Description: GIIM Note: maturase Location: 18670-18904 bp Feature: domain Description: GIIM Note: maturase Location: 1 8670-1 8904 bp Feature: domain Description: HNHc Note: nucleases Location: 19114-19273 bp Feature: domain Description: HNHc Note: nucleases Location: 1 91 1 4-1 9273 bp Feature: gene Location: 19427-19723 bp Feature: gene Location: 20031-20225 bp Feature: gene Location: 63587-63910 bp Feature: gene Location: 64240-64473 bp Feature: gene Location: 64524-66011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64929-65619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64929-6561 9 bp Feature: gene Location: 66116-67801 bp Feature: domain Description: Cloacin Location: 66245-67073 bp Feature: domain Description: Cloacin Location: 66245-67073 bp Feature: domain Description: E2R135 Location: 67082-67487 bp Feature: domain Description: E2R1 35 Location: 67082-67487 bp Feature: domain Description: Cytotoxic Location: 67541-67790 bp Feature: domain Description: Cytotoxic Location: 67541 -67790 bp Feature: gene Location: 67811-68068 bp Feature: domain Description: Cloacin_immun Location: 67817-68054 bp Feature: domain Description: Cloacin_immun Location: 6781 7-68054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UGLJ01000007.1 (197983 bp)
Overview 1 RT 1: 19245-22397 bp 2 RT 2: 114632-117104 bp Neighborhood of RT #1 [19245, 22397] RVT_N RVT-GII GIIM HNHc Neighborhood of RT #2 [114632, 117104] RVT_N RVT-GII Feature: gene Location: 19245-19469 bp Feature: gene Location: 19542-19709 bp Feature: gene Location: 19835-21502 bp Feature: domain Description: RVT_N Location: 19883-20120 bp Feature: domain Description: RVT_N Location: 19883-2 012 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20171-20813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0171-2 0813 bp Feature: domain Description: GIIM Note: maturase Location: 20864-21098 bp Feature: domain Description: GIIM Note: maturase Location: 2 0864-2 1098 bp Feature: domain Description: HNHc Note: nucleases Location: 21308-21467 bp Feature: domain Description: HNHc Note: nucleases Location: 2 1308-2 1467 bp Feature: gene Location: 21621-21917 bp Feature: gene Location: 22221-22397 bp Feature: gene Location: 114632-114877 bp Feature: gene Location: 114868-115107 bp Feature: gene Location: 115200-116210 bp Feature: domain Description: RVT_N Location: 115248-115485 bp Feature: domain Description: RVT_N Location: 1152 48-115485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115536-116178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115536-116178 bp Feature: gene Location: 116408-116539 bp Feature: gene Location: 116928-117104 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UGLJ01000002.1 (5314681 bp)
Overview 1 RT 1: 324438-330211 bp 2 RT 2: 701612-706607 bp 3 RT 3: 826772-830673 bp 4 RT 4: 2264921-2269802 bp 5 RT 5: 4466879-4471810 bp 6 RT 6: 5287045-5292131 bp Neighborhood of RT #1 [324438, 330222] PRK11089 PRK12395 RVT_N RVT-GII GIIM HNHc lacI rpmE2 Neighborhood of RT #2 [701612, 706621] RVT-GII UvrB Neighborhood of RT #3 [826772, 830702] Phage_GPA RVT-GII DNA_pack_C Neighborhood of RT #4 [2264921, 2269807] YccC PRK10016 RVT-GII dacD Neighborhood of RT #5 [4466879, 4471815] Phage_GPA RVT-GII DinI Neighborhood of RT #6 [5287045, 5292241] antibiot_sagB DDE_Tnp_1_5 RVT-GII IS285 IS285 Feature: gene Location: 324438-324752 bp Feature: domain Description: PRK11089 Location: 324507-324738 bp Feature: domain Description: PRK11089 Location: 3 24507-3 2473 8 bp Feature: gene Location: 324889-325683 bp Feature: domain Description: PRK12395 Location: 324892-325681 bp Feature: domain Description: PRK123 95 Location: 3 24892-3 25681 bp Feature: gene Location: 326302-327969 bp Feature: domain Description: RVT_N Location: 326350-326587 bp Feature: domain Description: RVT_N Location: 3 263 50-3 26587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 326638-327280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 2663 8-3 27280 bp Feature: domain Description: GIIM Note: maturase Location: 327331-327565 bp Feature: domain Description: GIIM Note: maturase Location: 3 273 3 1-3 27565 bp Feature: domain Description: HNHc Note: nucleases Location: 327775-327934 bp Feature: domain Description: HNHc Note: nucleases Location: 3 27775-3 2793 4 bp Feature: gene Location: 328773-329843 bp Feature: domain Description: lacI Location: 328776-329793 bp Feature: domain Description: lacI Location: 3 28776-3 29793 bp Feature: gene Location: 329959-330222 bp Feature: domain Description: rpmE2 Location: 329962-330211 bp Feature: domain Description: rpmE2 Location: 3 29962-3 3 0211 bp Feature: gene Location: 701612-701911 bp Feature: gene Location: 702067-702279 bp Feature: gene Location: 702655-704139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 703057-703747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 703 057-703 747 bp Feature: gene Location: 704193-704426 bp Feature: gene Location: 704600-706621 bp Feature: domain Description: UvrB Location: 704606-706607 bp Feature: domain Description: UvrB Location: 704606-706607 bp Feature: gene Location: 826772-827416 bp Feature: domain Description: Phage_GPA Location: 826781-826916 bp Feature: domain Description: Phage_GPA Location: 826781-826916 bp Feature: gene Location: 827867-828100 bp Feature: gene Location: 828151-829638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 828556-829246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 828556-829246 bp Feature: gene Location: 829727-829915 bp Feature: gene Location: 830238-830702 bp Feature: domain Description: DNA_pack_C Location: 830355-830673 bp Feature: domain Description: DNA_pack_C Location: 83 03 55-83 0673 bp Feature: gene Location: 2264921-2265979 bp Feature: domain Description: YccC Location: 2264927-2265965 bp Feature: domain Description: YccC Location: 2264927-2265965 bp Feature: gene Location: 2266078-2266428 bp Feature: domain Description: PRK10016 Location: 2266084-2266417 bp Feature: domain Description: PRK10016 Location: 2266084-2266417 bp Feature: gene Location: 2266633-2268117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2267035-2267725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 226703 5-2267725 bp Feature: gene Location: 2268171-2268404 bp Feature: gene Location: 2268638-2269807 bp Feature: domain Description: dacD Location: 2268647-2269802 bp Feature: domain Description: dacD Location: 2268647-2269802 bp Feature: gene Location: 4466879-4469284 bp Feature: domain Description: Phage_GPA Location: 4467443-4468409 bp Feature: domain Description: Phage_GPA Location: 4467443 -4468409 bp Feature: gene Location: 4469473-4469706 bp Feature: gene Location: 4469757-4471244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4470162-4470852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4470162-4470852 bp Feature: gene Location: 4471380-4471568 bp Feature: gene Location: 4471534-4471815 bp Feature: domain Description: DinI Location: 4471627-4471810 bp Feature: domain Description: DinI Location: 4471627-4471810 bp Feature: gene Location: 5287045-5287866 bp Feature: domain Description: antibiot_sagB Location: 5287435-5287861 bp Feature: domain Description: antibiot_sagB Location: 528743 5-5287861 bp Feature: gene Location: 5289217-5289552 bp Feature: domain Description: DDE_Tnp_1_5 Location: 5289223-5289448 bp Feature: domain Description: DDE_Tnp_1_5 Location: 5289223 -5289448 bp Feature: gene Location: 5290179-5290973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5290182-5290611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5290182-5290611 bp Feature: gene Location: 5291034-5291936 bp Feature: domain Description: IS285 Location: 5291037-5291925 bp Feature: domain Description: IS285 Location: 529103 7-5291925 bp Feature: gene Location: 5291963-5292241 bp Feature: domain Description: IS285 Location: 5291993-5292131 bp Feature: domain Description: IS285 Location: 5291993 -529213 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT