myRT

myRT report for GCA_900451835.1_38109_A01

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Seq: UASO01000005.1 (601144 bp)
Overview 1 RT 1: 300694-304660 bp 2 RT 2: 415375-418669 bp Neighborhood of RT #1 [300694, 304671] DUF2502 HNHc RVT-GII RVT-GII PRK00701 Neighborhood of RT #2 [415375, 418669] Terminase_2 RVT-GII Feature: gene Location: 300694-301047 bp Feature: domain Description: DUF2502 Location: 300763-301000 bp Feature: domain Description: DUF2502 Location: 300763-301 000 bp Feature: gene Location: 301141-301473 bp Feature: domain Description: HNHc Note: nucleases Location: 301279-301438 bp Feature: domain Description: HNHc Note: nucleases Location: 301 279-301 438 bp Feature: gene Location: 301845-302144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301848-302037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301 848-302037 bp Feature: gene Location: 302156-302401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 302159-302393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3021 59-302393 bp Feature: gene Location: 302685-303206 bp Feature: gene Location: 303430-304671 bp Feature: domain Description: PRK00701 Location: 303439-304660 bp Feature: domain Description: PRK00701 Location: 303439-304660 bp Feature: gene Location: 415375-415959 bp Feature: domain Description: Terminase_2 Location: 415420-415885 bp Feature: domain Description: Terminase_2 Location: 41 5420-41 5885 bp Feature: gene Location: 416017-416538 bp Feature: gene Location: 416424-417908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416826-417516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 6826-41 751 6 bp Feature: gene Location: 417962-418195 bp Feature: gene Location: 418331-418669 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UASO01000008.1 (136604 bp)
Overview 1 RT 1: 23193-26226 bp 2 RT 2: 35013-39104 bp 3 RT 3: 46739-50211 bp 4 RT 4: 126316-131260 bp Neighborhood of RT #1 [23193, 26264] IS285 RVT-GII Cloacin Cloacin Neighborhood of RT #2 [35013, 39104] RVT-GII Cloacin E2R135 Neighborhood of RT #3 [46739, 50249] RVT-GII PRK10276 umuC Neighborhood of RT #4 [126316, 131265] IS285 RVT-GII PRK10276 umuC Feature: gene Location: 23193-23471 bp Feature: domain Description: IS285 Location: 23223-23361 bp Feature: domain Description: IS2 85 Location: 2 32 2 3-2 3361 bp Feature: gene Location: 23668-23901 bp Feature: gene Location: 23952-25436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24357-24969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 4357-2 4969 bp Feature: gene Location: 25541-25951 bp Feature: domain Description: Cloacin Location: 25658-25943 bp Feature: domain Description: Cloacin Location: 2 5658-2 5943 bp Feature: gene Location: 26019-26264 bp Feature: domain Description: Cloacin Location: 26022-26226 bp Feature: domain Description: Cloacin Location: 2 602 2 -2 62 2 6 bp Feature: gene Location: 35013-35258 bp Feature: gene Location: 35618-35851 bp Feature: gene Location: 35902-37389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36307-36997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36307-36997 bp Feature: gene Location: 37494-38861 bp Feature: domain Description: Cloacin Location: 37623-38451 bp Feature: domain Description: Cloacin Location: 3762 3-38451 bp Feature: domain Description: E2R135 Location: 38460-38844 bp Feature: domain Description: E2 R135 Location: 38460-38844 bp Feature: gene Location: 38967-39104 bp Feature: gene Location: 46739-47248 bp Feature: gene Location: 47578-47811 bp Feature: gene Location: 47862-49349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48267-48957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 482 67-48957 bp Feature: gene Location: 49426-49851 bp Feature: domain Description: PRK10276 Location: 49435-49837 bp Feature: domain Description: PRK102 76 Location: 49435-49837 bp Feature: gene Location: 49851-50249 bp Feature: domain Description: umuC Location: 49854-50211 bp Feature: domain Description: umuC Location: 49854-502 11 bp Feature: gene Location: 126316-127524 bp Feature: domain Description: IS285 Location: 126346-127513 bp Feature: domain Description: IS2 85 Location: 12 6346-12 7513 bp Feature: gene Location: 127721-127954 bp Feature: gene Location: 128005-129492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 128410-129100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 8410-12 9100 bp Feature: gene Location: 129569-129994 bp Feature: domain Description: PRK10276 Location: 129578-129980 bp Feature: domain Description: PRK102 76 Location: 12 9578-12 9980 bp Feature: gene Location: 129994-131265 bp Feature: domain Description: umuC Location: 129997-131260 bp Feature: domain Description: umuC Location: 12 9997-1312 60 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UASO01000003.1 (636636 bp)
Overview 1 RT 1: 33964-38409 bp 2 RT 2: 144144-148107 bp 3 RT 3: 281622-286297 bp 4 RT 4: 523624-525397 bp Neighborhood of RT #1 [33964, 38409] PRK10808 sula RVT-GII Neighborhood of RT #2 [144144, 148109] PRK10597 RVT-GII PRK05451 PRK10598 Neighborhood of RT #3 [281622, 286297] Dcm Dcm RVT-GII DinI Neighborhood of RT #4 [523624, 525397] GIIM HNHc RVT-GII Feature: gene Location: 33964-35034 bp Feature: domain Description: PRK10808 Location: 33967-35029 bp Feature: domain Description: PRK10808 Location: 3 3 967-3 5029 bp Feature: gene Location: 35387-35896 bp Feature: domain Description: sula Location: 35393-35894 bp Feature: domain Description: sula Location: 3 53 93 -3 5894 bp Feature: gene Location: 35975-37048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36005-36656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 6005-3 6656 bp Feature: gene Location: 37065-37550 bp Feature: gene Location: 38278-38409 bp Feature: gene Location: 144144-144395 bp Feature: domain Description: PRK10597 Location: 144147-144384 bp Feature: domain Description: PRK10597 Location: 144147-1443 84 bp Feature: gene Location: 144513-144746 bp Feature: gene Location: 144797-146284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145202-145892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145202-145892 bp Feature: gene Location: 146377-147423 bp Feature: domain Description: PRK05451 Location: 146392-147418 bp Feature: domain Description: PRK05451 Location: 1463 92-147418 bp Feature: gene Location: 147549-148109 bp Feature: domain Description: PRK10598 Location: 147552-148107 bp Feature: domain Description: PRK10598 Location: 147552-148107 bp Feature: gene Location: 281622-283703 bp Feature: domain Description: Dcm Location: 281643-282633 bp Feature: domain Description: Dcm Location: 281643 -28263 3 bp Feature: domain Description: Dcm Location: 283488-283662 bp Feature: domain Description: Dcm Location: 283 488-283 662 bp Feature: gene Location: 283910-284143 bp Feature: gene Location: 284194-285681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 284599-285289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 284599-285289 bp Feature: gene Location: 285779-285994 bp Feature: domain Description: DinI Location: 285812-285989 bp Feature: domain Description: DinI Location: 285812-285989 bp Feature: gene Location: 286148-286297 bp Feature: gene Location: 523624-523767 bp Feature: gene Location: 523982-524563 bp Feature: domain Description: GIIM Note: maturase Location: 524006-524159 bp Feature: domain Description: GIIM Note: maturase Location: 524006-524159 bp Feature: domain Description: HNHc Note: nucleases Location: 524369-524528 bp Feature: domain Description: HNHc Note: nucleases Location: 5243 69-524528 bp Feature: gene Location: 524696-524995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 524699-524978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 524699-524978 bp Feature: gene Location: 524861-525190 bp Feature: gene Location: 525200-525397 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UASO01000012.1 (287808 bp)
Overview 1 RT 1: 177701-179333 bp Neighborhood of RT #1 [177701, 179467] RVT-GII group_II_RT_mat Feature: gene Location: 177701-177934 bp Feature: gene Location: 177988-178215 bp Feature: gene Location: 178286-178681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 178388-178679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 178388-178679 bp Feature: gene Location: 178717-178938 bp Feature: gene Location: 179138-179467 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 179144-179333 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 17914 4 -179333 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UASO01000001.1 (131462 bp)
Overview 1 RT 1: 38087-42049 bp Neighborhood of RT #1 [38087, 42054] dacD RVT-GII PRK10016 YccC Feature: gene Location: 38087-39256 bp Feature: domain Description: dacD Location: 38096-39251 bp Feature: domain Description: dacD Location: 38096-3925 1 bp Feature: gene Location: 39489-39722 bp Feature: gene Location: 39773-41260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40178-40868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40178-40868 bp Feature: gene Location: 41342-41815 bp Feature: domain Description: PRK10016 Location: 41345-41804 bp Feature: domain Description: PRK10016 Location: 41345 -41804 bp Feature: gene Location: 41899-42054 bp Feature: domain Description: YccC Location: 41920-42049 bp Feature: domain Description: YccC Location: 41920-42049 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UASO01000004.1 (2348375 bp)
Overview 1 RT 1: 433186-437456 bp 2 RT 2: 511169-518278 bp 3 RT 3: 1993002-1995238 bp Neighborhood of RT #1 [433186, 437467] DUF1804 RVT_N RVT-GII GIIM HNHc sgaE hxl6Piso_put Neighborhood of RT #2 [511169, 518278] antibiot_sagB DDE_Tnp_1_5 RVT-GII Zn_Tnp_IS1 HTH_Tnp_IS1 DDE_Tnp_IS1 IS285 RVT-GII Neighborhood of RT #3 [1993002, 1995238] PRK12842 RVT-GII GIIM HNHc Feature: gene Location: 433186-433407 bp Feature: gene Location: 433400-433549 bp Feature: domain Description: DUF1804 Location: 433418-433535 bp Feature: domain Description: DUF1804 Location: 433418-433535 bp Feature: gene Location: 433613-435280 bp Feature: domain Description: RVT_N Location: 433661-433898 bp Feature: domain Description: RVT_N Location: 4336 6 1-433898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433949-434591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433949-434591 bp Feature: domain Description: GIIM Note: maturase Location: 434642-434876 bp Feature: domain Description: GIIM Note: maturase Location: 4346 42-434876 bp Feature: domain Description: HNHc Note: nucleases Location: 435086-435245 bp Feature: domain Description: HNHc Note: nucleases Location: 435086 -435245 bp Feature: gene Location: 436038-436724 bp Feature: domain Description: sgaE Location: 436041-436722 bp Feature: domain Description: sgaE Location: 436 041-436 722 bp Feature: gene Location: 436724-437467 bp Feature: domain Description: hxl6Piso_put Location: 436727-437456 bp Feature: domain Description: hxl6 Piso_put Location: 436 727-437456 bp Feature: gene Location: 511169-511990 bp Feature: domain Description: antibiot_sagB Location: 511559-511985 bp Feature: domain Description: antibiot_sagB Location: 511559-511985 bp Feature: gene Location: 513340-513675 bp Feature: domain Description: DDE_Tnp_1_5 Location: 513346-513571 bp Feature: domain Description: DDE_Tnp_1_5 Location: 513346 -513571 bp Feature: gene Location: 514302-515096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 514305-514734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 514305-514734 bp Feature: gene Location: 515223-515447 bp Feature: domain Description: Zn_Tnp_IS1 Location: 515229-515280 bp Feature: domain Description: Zn_Tnp_IS1 Location: 515229-515280 bp Feature: domain Description: HTH_Tnp_IS1 Location: 515301-515436 bp Feature: domain Description: HTH_Tnp_IS1 Location: 515301-515436 bp Feature: gene Location: 515474-515869 bp Feature: domain Description: DDE_Tnp_IS1 Location: 515480-515867 bp Feature: domain Description: DDE_Tnp_IS1 Location: 515480-51586 7 bp Feature: gene Location: 516075-517283 bp Feature: domain Description: IS285 Location: 516105-517272 bp Feature: domain Description: IS285 Location: 516 105-517272 bp Feature: gene Location: 517342-517695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 517627-517681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5176 27-5176 81 bp Feature: gene Location: 517852-517992 bp Feature: gene Location: 518000-518278 bp Feature: gene Location: 1993002-1993571 bp Feature: domain Description: PRK12842 Location: 1993017-1993563 bp Feature: domain Description: PRK12842 Location: 1993017-199356 3 bp Feature: gene Location: 1993584-1993748 bp Feature: gene Location: 1993822-1994838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1993825-1994149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1993825-1994149 bp Feature: domain Description: GIIM Note: maturase Location: 1994200-1994434 bp Feature: domain Description: GIIM Note: maturase Location: 1994200-1994434 bp Feature: domain Description: HNHc Note: nucleases Location: 1994644-1994803 bp Feature: domain Description: HNHc Note: nucleases Location: 19946 44-1994803 bp Feature: gene Location: 1994904-1995032 bp Feature: gene Location: 1995041-1995238 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UASO01000011.1 (161099 bp)
Overview 1 RT 1: 46697-50510 bp Neighborhood of RT #1 [46697, 50510] DDE_Tnp_IS1 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 46697-47074 bp Feature: domain Description: DDE_Tnp_IS1 Location: 46700-47072 bp Feature: domain Description: DDE_Tnp_IS1 Location: 467 00-47 07 2 bp Feature: gene Location: 47076-47288 bp Feature: gene Location: 47654-49321 bp Feature: domain Description: RVT_N Location: 47702-47939 bp Feature: domain Description: RVT_N Location: 47 7 02-47 939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47990-48632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47 990-48632 bp Feature: domain Description: GIIM Note: maturase Location: 48683-48917 bp Feature: domain Description: GIIM Note: maturase Location: 48683-48917 bp Feature: domain Description: HNHc Note: nucleases Location: 49127-49286 bp Feature: domain Description: HNHc Note: nucleases Location: 49127 -49286 bp Feature: gene Location: 49440-49736 bp Feature: gene Location: 50040-50510 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UASO01000002.1 (102850 bp)
Overview 1 RT 1: 90979-94640 bp Neighborhood of RT #1 [90979, 94640] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 90979-91140 bp Feature: gene Location: 91284-91640 bp Feature: gene Location: 92089-93756 bp Feature: domain Description: RVT_N Location: 92137-92374 bp Feature: domain Description: RVT_N Location: 92137-92374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92425-93067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92425-93067 bp Feature: domain Description: GIIM Note: maturase Location: 93118-93352 bp Feature: domain Description: GIIM Note: maturase Location: 93118 -93352 bp Feature: domain Description: HNHc Note: nucleases Location: 93562-93721 bp Feature: domain Description: HNHc Note: nucleases Location: 93562-93721 bp Feature: gene Location: 94122-94346 bp Feature: gene Location: 94479-94640 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT