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myRT report for GCA_900451845.1_40400_D01
Download annotations/find similar RTs
Seq:
UGLT01000005.1 (5301493 bp)
Overview
1
RT 1: 738243-744865 bp
Neighborhood of RT #1 [738243, 744867]
FimC
FimD
RVT-UG4
Integrase_1
INT_P4_C
Feature: gene
Location: 738243-738836 bp
Feature: domain
Description: FimC
Location: 738264-738819 bp
Feature: domain
Description: FimC
Location: 738264-73881 9 bp
Feature: gene
Location: 738868-741477 bp
Feature: domain
Description: FimD
Location: 738925-741466 bp
Feature: domain
Description: FimD
Location: 738925-741 466 bp
Feature: gene
Location: 741477-743555 bp
Feature: RT
Description: RVT-UG4
Note: UG4 RT
Location: 741885-742329 bp
Feature: RT
Description: RVT-UG4
Note: UG4 RT
Location: 741 885-742329 bp
Feature: gene
Location: 743612-744052 bp
Feature: domain
Description: Integrase_1
Location: 743618-743834 bp
Feature: domain
Description: Integrase_1
Location: 74361 8-743834 bp
Feature: gene
Location: 744313-744867 bp
Feature: domain
Description: INT_P4_C
Location: 744319-744865 bp
Feature: domain
Description: INT_P4_C
Location: 74431 9-744865 bp
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Associated domains:
myRT
FimC (COG3121)
,
FimD (COG3188)
,
RVT-UG4
,
Integrase_1 (pfam12835)
,
INT_P4_C (cd00801)