myRT

myRT report for GCA_900452035.1_31885_E02

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Seq: UGLW01000001.1 (125936 bp)
Overview 1 RT 1: 8332-14026 bp Neighborhood of RT #1 [8332, 14026] PRK10044 IS285 RVT_N RVT-GII GIIM Feature: gene Location: 8332-10488 bp Feature: domain Description: PRK10044 Location: 8398-10477 bp Feature: domain Description: PRK1 0044 Location: 8398-1 0477 bp Feature: gene Location: 10892-11524 bp Feature: domain Description: IS285 Location: 10922-11522 bp Feature: domain Description: IS285 Location: 1 0922-1 1 522 bp Feature: gene Location: 11583-13193 bp Feature: domain Description: RVT_N Location: 11631-11868 bp Feature: domain Description: RVT_N Location: 1 1 631 -1 1 868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11919-12561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 91 9-1 2561 bp Feature: domain Description: GIIM Note: maturase Location: 12612-12846 bp Feature: domain Description: GIIM Note: maturase Location: 1 261 2-1 2846 bp Feature: gene Location: 13312-13608 bp Feature: gene Location: 13766-14026 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UGLW01000004.1 (71359 bp)
Overview 1 RT 1: 36212-38925 bp Neighborhood of RT #1 [36212, 39005] RVT_N RVT-GII GIIM HNHc HsdM Feature: gene Location: 36212-36421 bp Feature: domain Description: RVT_N Location: 36260-36389 bp Feature: domain Description: RVT_N Location: 362 60-36389 bp Feature: gene Location: 36461-36658 bp Feature: gene Location: 36606-37166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36609-37146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36609-37146 bp Feature: gene Location: 37214-37882 bp Feature: domain Description: GIIM Note: maturase Location: 37244-37478 bp Feature: domain Description: GIIM Note: maturase Location: 372 44-37478 bp Feature: domain Description: HNHc Note: nucleases Location: 37688-37847 bp Feature: domain Description: HNHc Note: nucleases Location: 37688-37847 bp Feature: gene Location: 38220-39005 bp Feature: domain Description: HsdM Location: 38568-38925 bp Feature: domain Description: HsdM Location: 38568-3892 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UGLW01000006.1 (86376 bp)
Overview 1 RT 1: 7024-11204 bp 2 RT 2: 32265-36842 bp 3 RT 3: 84477-86369 bp Neighborhood of RT #1 [7024, 11206] umuC PRK10276 RVT-GII RVT-GII DDE_Tnp_IS1 Neighborhood of RT #2 [32265, 36842] PRK13709 RVT-GII GIIM HNHc RVT_N Neighborhood of RT #3 [84477, 86374] umuC RVT-GII PRK10276 Feature: gene Location: 7024-8295 bp Feature: domain Description: umuC Location: 7027-8290 bp Feature: domain Description: umuC Location: 7027-8290 bp Feature: gene Location: 8295-8720 bp Feature: domain Description: PRK10276 Location: 8304-8706 bp Feature: domain Description: PRK10276 Location: 83 04-8706 bp Feature: gene Location: 8797-9330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8803-8938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8803 -893 8 bp Feature: gene Location: 9333-10283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9738-10263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 973 8-10263 bp Feature: gene Location: 10334-10567 bp Feature: gene Location: 10829-11206 bp Feature: domain Description: DDE_Tnp_IS1 Location: 10832-11204 bp Feature: domain Description: DDE_Tnp_IS1 Location: 1083 2-11204 bp Feature: gene Location: 32265-34445 bp Feature: domain Description: PRK13709 Location: 32292-34296 bp Feature: domain Description: PRK13 709 Location: 3 2292-3 4296 bp Feature: gene Location: 34469-34633 bp Feature: gene Location: 34759-35955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34765-35266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 4765-3 5266 bp Feature: domain Description: GIIM Note: maturase Location: 35317-35551 bp Feature: domain Description: GIIM Note: maturase Location: 3 53 17-3 5551 bp Feature: domain Description: HNHc Note: nucleases Location: 35761-35920 bp Feature: domain Description: HNHc Note: nucleases Location: 3 5761-3 5920 bp Feature: gene Location: 35982-36428 bp Feature: domain Description: RVT_N Location: 36030-36267 bp Feature: domain Description: RVT_N Location: 3 603 0-3 6267 bp Feature: gene Location: 36444-36842 bp Feature: gene Location: 84477-84857 bp Feature: domain Description: umuC Location: 84513-84801 bp Feature: domain Description: umuC Location: 84513 -84801 bp Feature: gene Location: 84929-85276 bp Feature: gene Location: 85505-86374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85517-85679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85517-85679 bp Feature: domain Description: PRK10276 Location: 86159-86369 bp Feature: domain Description: PRK10276 Location: 86159-863 69 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UGLW01000003.1 (5374653 bp)
Overview 1 RT 1: 1759027-1762330 bp 2 RT 2: 3187331-3190474 bp 3 RT 3: 3435605-3441445 bp 4 RT 4: 3878606-3882011 bp 5 RT 5: 4570246-4574549 bp Neighborhood of RT #1 [1759027, 1762392] RVT-GII PRK10016 YccC Neighborhood of RT #2 [3187331, 3190485] pyrC_dimer pyrC_dimer RVT-GII PRK10597 Neighborhood of RT #3 [3435605, 3441450] PRTases_typeI RVT-GII dacD Neighborhood of RT #4 [3878606, 3882028] PRK10276 RVT-GII DUF551 Neighborhood of RT #5 [4570246, 4574599] PRK10276 RVT-GII TraG_N TraG_N Feature: gene Location: 1759027-1759257 bp Feature: gene Location: 1759707-1759940 bp Feature: gene Location: 1759994-1761121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1760396-1761008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1760396-1761008 bp Feature: gene Location: 1761358-1761645 bp Feature: gene Location: 1761694-1762392 bp Feature: domain Description: PRK10016 Location: 1761697-1762018 bp Feature: domain Description: PRK10016 Location: 1761697-1762018 bp Feature: domain Description: YccC Location: 1762132-1762330 bp Feature: domain Description: YccC Location: 1762132-1762330 bp Feature: gene Location: 3187331-3187666 bp Feature: domain Description: pyrC_dimer Location: 3187334-3187658 bp Feature: domain Description: pyrC_dimer Location: 3187334 -3187658 bp Feature: gene Location: 3187689-3188252 bp Feature: domain Description: pyrC_dimer Location: 3187692-3188247 bp Feature: domain Description: pyrC_dimer Location: 3187692-318824 7 bp Feature: gene Location: 3188345-3189829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3188747-3189437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 318874 7-31894 37 bp Feature: gene Location: 3189883-3190116 bp Feature: gene Location: 3190234-3190485 bp Feature: domain Description: PRK10597 Location: 3190237-3190474 bp Feature: domain Description: PRK10597 Location: 3190237-31904 74 bp Feature: gene Location: 3435605-3436084 bp Feature: domain Description: PRTases_typeI Location: 3435872-3436040 bp Feature: domain Description: PRTases_typeI Location: 34 35872-34 3604 0 bp Feature: gene Location: 3437377-3437679 bp Feature: gene Location: 3438277-3439761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3438679-3439369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34 38679-34 39369 bp Feature: gene Location: 3439815-3440048 bp Feature: gene Location: 3440281-3441450 bp Feature: domain Description: dacD Location: 3440290-3441445 bp Feature: domain Description: dacD Location: 34 4 0290-34 4 14 4 5 bp Feature: gene Location: 3878606-3878935 bp Feature: domain Description: PRK10276 Location: 3878612-3878765 bp Feature: domain Description: PRK10276 Location: 3878612-3878765 bp Feature: gene Location: 3879130-3879342 bp Feature: gene Location: 3879640-3880824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3879745-3880432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 387974 5-38804 32 bp Feature: gene Location: 3880921-3881259 bp Feature: gene Location: 3881252-3882028 bp Feature: domain Description: DUF551 Location: 3881819-3882011 bp Feature: domain Description: DUF551 Location: 3881819-3882011 bp Feature: gene Location: 4570246-4570470 bp Feature: domain Description: PRK10276 Location: 4570297-4570432 bp Feature: domain Description: PRK10276 Location: 4 570297-4 5704 32 bp Feature: gene Location: 4570659-4570892 bp Feature: gene Location: 4570946-4572430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4571348-4572038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 57134 8-4 572038 bp Feature: gene Location: 4573050-4574375 bp Feature: domain Description: TraG_N Location: 4573053-4574247 bp Feature: domain Description: TraG_N Location: 4 573053-4 574 24 7 bp Feature: gene Location: 4574375-4574599 bp Feature: domain Description: TraG_N Location: 4574399-4574549 bp Feature: domain Description: TraG_N Location: 4 574 399-4 574 54 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT