myRT

myRT report for GCA_900452495.1_44927_F01

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Seq: UGNR01000002.1 (2387729 bp)
Overview 1 RT 1: 430019-436181 bp 2 RT 2: 1397786-1402580 bp 3 RT 3: 1724733-1729296 bp 4 RT 4: 2084957-2089844 bp 5 RT 5: 2134349-2138470 bp Neighborhood of RT #1 [430019, 436198] dnaA beta_clamp RVT-GII GIIM S4_2 recF Neighborhood of RT #2 [1397786, 1402585] DDE_5 group_II_RT_mat RVT-GII ribH PRK09311 Neighborhood of RT #3 [1724733, 1729325] PRK14822 RVT-GII GIIM MPP_GpdQ CNP_C_terminal Neighborhood of RT #4 [2084957, 2089855] PBP2_Lactococcal_OppA_like OsmC RVT-GII GIIM PRK05439 Transposase_mut Neighborhood of RT #5 [2134349, 2138526] Transposase_mut SlpA RVT-GII TIGR02452 DUF3100 Feature: gene Location: 430019-431386 bp Feature: domain Description: dnaA Location: 430034-431381 bp Feature: domain Description: dnaA Location: 430034-431 381 bp Feature: gene Location: 431561-432691 bp Feature: domain Description: beta_clamp Location: 431564-432683 bp Feature: domain Description: beta_clamp Location: 431 564-432683 bp Feature: gene Location: 433307-434605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433508-434126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433508-4341 26 bp Feature: domain Description: GIIM Note: maturase Location: 434183-434390 bp Feature: domain Description: GIIM Note: maturase Location: 4341 83-434390 bp Feature: gene Location: 434847-435062 bp Feature: domain Description: S4_2 Location: 434868-435054 bp Feature: domain Description: S4_2 Location: 434868-435054 bp Feature: gene Location: 435071-436198 bp Feature: domain Description: recF Location: 435074-436181 bp Feature: domain Description: recF Location: 435074-4361 81 bp Feature: gene Location: 1397786-1399291 bp Feature: domain Description: DDE_5 Location: 1398110-1398770 bp Feature: domain Description: DDE_5 Location: 1 3981 1 0-1 398770 bp Feature: gene Location: 1400045-1400227 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1400078-1400198 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 400078-1 4001 98 bp Feature: gene Location: 1400353-1400850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1400356-1400434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 400356-1 400434 bp Feature: gene Location: 1400928-1401392 bp Feature: domain Description: ribH Location: 1400931-1401387 bp Feature: domain Description: ribH Location: 1 400931 -1 401 387 bp Feature: gene Location: 1401407-1402585 bp Feature: domain Description: PRK09311 Location: 1401416-1402580 bp Feature: domain Description: PRK0931 1 Location: 1 401 41 6-1 402580 bp Feature: gene Location: 1724733-1724897 bp Feature: gene Location: 1724908-1725531 bp Feature: domain Description: PRK14822 Location: 1724911-1725499 bp Feature: domain Description: PRK1 4822 Location: 1 72491 1 -1 725499 bp Feature: gene Location: 1726202-1727500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1726403-1727021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 726403-1 727021 bp Feature: domain Description: GIIM Note: maturase Location: 1727078-1727285 bp Feature: domain Description: GIIM Note: maturase Location: 1 727078-1 727285 bp Feature: gene Location: 1727606-1728049 bp Feature: gene Location: 1728093-1729325 bp Feature: domain Description: MPP_GpdQ Location: 1728231-1728843 bp Feature: domain Description: MPP_GpdQ Location: 1 728231 -1 728843 bp Feature: domain Description: CNP_C_terminal Location: 1728975-1729296 bp Feature: domain Description: CNP_C_terminal Location: 1 728975-1 729296 bp Feature: gene Location: 2084957-2085271 bp Feature: domain Description: PBP2_Lactococcal_OppA_like Location: 2085104-2085248 bp Feature: domain Description: PBP2_Lactococcal_OppA_like Location: 20851 04-2085248 bp Feature: gene Location: 2085922-2086323 bp Feature: domain Description: OsmC Location: 2086024-2086315 bp Feature: domain Description: OsmC Location: 2086024-208631 5 bp Feature: gene Location: 2086514-2087812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2086715-2087333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208671 5-2087333 bp Feature: domain Description: GIIM Note: maturase Location: 2087390-2087597 bp Feature: domain Description: GIIM Note: maturase Location: 2087390-2087597 bp Feature: gene Location: 2088418-2088633 bp Feature: domain Description: PRK05439 Location: 2088424-2088628 bp Feature: domain Description: PRK05439 Location: 2088424-2088628 bp Feature: gene Location: 2088806-2089855 bp Feature: domain Description: Transposase_mut Location: 2088845-2089844 bp Feature: domain Description: Transposase_mut Location: 2088845-2089844 bp Feature: gene Location: 2134349-2135527 bp Feature: domain Description: Transposase_mut Location: 2134388-2135462 bp Feature: domain Description: Transposase_mut Location: 21 34388-21 35462 bp Feature: gene Location: 2135708-2136487 bp Feature: domain Description: SlpA Location: 2136323-2136479 bp Feature: domain Description: SlpA Location: 21 36323-21 36479 bp Feature: gene Location: 2136572-2137084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2136581-2136773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 36581 -21 36773 bp Feature: domain Description: TIGR02452 Location: 2136911-2137070 bp Feature: domain Description: TIGR02452 Location: 21 3691 1 -21 37070 bp Feature: gene Location: 2137224-2137526 bp Feature: gene Location: 2137708-2138526 bp Feature: domain Description: DUF3100 Location: 2137768-2138470 bp Feature: domain Description: DUF31 00 Location: 21 37768-21 38470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnaA (PRK14088), beta_clamp (cl29549), RVT-GII, GIIM (pfam08388), S4_2 (pfam13275), recF (PRK14079), DDE_5 (pfam13546), group_II_RT_mat (TIGR04416), ribH (PRK00061), PRK09311 (bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II)
PRK14822 (XTP/dITP diphosphatase), MPP_GpdQ (cd07402), CNP_C_terminal (pfam17839), PBP2_Lactococcal_OppA_like (cd08510), OsmC (pfam02566), PRK05439 (pantothenate kinase; Provisional), Transposase_mut (pfam00872), SlpA (COG1047), TIGR02452 (TIGR02452 family protein), DUF3100 (pfam11299)

Seq: UGNR01000001.1 (192294 bp)
Overview 1 RT 1: 160515-166159 bp Neighborhood of RT #1 [160515, 166159] HflC PRK07116 PRK00885 RVT-GII GIIM YesN Feature: gene Location: 160515-161396 bp Feature: domain Description: HflC Location: 160521-161325 bp Feature: domain Description: HflC Location: 16052 1-16132 5 bp Feature: gene Location: 161537-163180 bp Feature: domain Description: PRK07116 Location: 161714-162077 bp Feature: domain Description: PRK07116 Location: 161714-162 077 bp Feature: domain Description: PRK00885 Location: 162113-163172 bp Feature: domain Description: PRK00885 Location: 162 113-163172 bp Feature: gene Location: 163973-165271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 164174-164792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 164174-164792 bp Feature: domain Description: GIIM Note: maturase Location: 164849-165056 bp Feature: domain Description: GIIM Note: maturase Location: 164849-165056 bp Feature: gene Location: 165366-165734 bp Feature: domain Description: YesN Location: 165381-165705 bp Feature: domain Description: YesN Location: 165381-165705 bp Feature: gene Location: 165902-166159 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HflC (COG0330), PRK07116 (flavodoxin; Provisional), PRK00885 (phosphoribosylamine--glycine ligase; Provisional), RVT-GII, GIIM (pfam08388), YesN (COG4753)