myRT

myRT report for GCA_900452545.1_53550_A01

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Seq: UGOB01000002.1 (157460 bp)
Overview 1 RT 1: 98879-105587 bp Neighborhood of RT #1 [98879, 105616] PRK05090 RVT-GII GIIM DUF4158 DDE_Tnp_Tn3 PinE Feature: gene Location: 98879-99091 bp Feature: domain Description: PRK05090 Location: 98903-99089 bp Feature: domain Description: PRK05090 Location: 98903-99089 bp Feature: gene Location: 99248-99892 bp Feature: gene Location: 100001-101326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100286-100973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 00286-1 00973 bp Feature: domain Description: GIIM Note: maturase Location: 101078-101258 bp Feature: domain Description: GIIM Note: maturase Location: 1 01 078-1 01 258 bp Feature: gene Location: 101836-104883 bp Feature: domain Description: DUF4158 Location: 101863-102352 bp Feature: domain Description: DUF41 58 Location: 1 01 863-1 02352 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 103615-104791 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 1 0361 5-1 04791 bp Feature: gene Location: 105032-105616 bp Feature: domain Description: PinE Location: 105035-105587 bp Feature: domain Description: PinE Location: 1 05035-1 05587 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05090 (hypothetical protein; Validated), RVT-GII, GIIM (pfam08388), DUF4158 (pfam13700), DDE_Tnp_Tn3 (pfam01526), PinE (COG1961)

Seq: UGOB01000001.1 (3818924 bp)
Overview 1 RT 1: 1890490-1897708 bp 2 RT 2: 3040160-3044863 bp 3 RT 3: 3744518-3755997 bp Neighborhood of RT #1 [1890490, 1897728] mcbC-like_oxidoreductase mcbC-like_oxidoreductase DDE_Tnp_Tn3 RVT-GII GIIM LomR LomR DDE_Tnp_Tn3 Neighborhood of RT #2 [3040160, 3044863] RtcB RVT-GII GIIM Neighborhood of RT #3 [3744518, 3755997] KOG1320 SidE COG5001 RVT-UNC CAP_ED CPBP Feature: gene Location: 1890490-1892460 bp Feature: domain Description: mcbC-like_oxidoreductase Location: 1891210-1891696 bp Feature: domain Description: mcbC-like_oxidoreductase Location: 18912 10-1891696 bp Feature: domain Description: mcbC-like_oxidoreductase Location: 1891939-1892452 bp Feature: domain Description: mcbC-like_oxidoreductase Location: 1891939-1892 452 bp Feature: gene Location: 1892715-1893221 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 1892910-1893126 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 1892 910-189312 6 bp Feature: gene Location: 1893731-1895056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1894016-1894703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1894016-1894703 bp Feature: domain Description: GIIM Note: maturase Location: 1894808-1894988 bp Feature: domain Description: GIIM Note: maturase Location: 1894808-1894988 bp Feature: gene Location: 1895430-1896788 bp Feature: domain Description: LomR Location: 1895520-1896081 bp Feature: domain Description: LomR Location: 189552 0-1896081 bp Feature: domain Description: LomR Location: 1896180-1896675 bp Feature: domain Description: LomR Location: 1896180-1896675 bp Feature: gene Location: 1897552-1897728 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 1897558-1897708 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 1897558-1897708 bp Feature: gene Location: 3040160-3041590 bp Feature: domain Description: RtcB Location: 3040220-3041588 bp Feature: domain Description: RtcB Location: 30402 2 0-3041588 bp Feature: gene Location: 3041745-3041978 bp Feature: gene Location: 3042284-3043609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3042569-3043256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3042 569-30432 56 bp Feature: domain Description: GIIM Note: maturase Location: 3043361-3043541 bp Feature: domain Description: GIIM Note: maturase Location: 3043361-3043541 bp Feature: gene Location: 3044154-3044318 bp Feature: gene Location: 3044504-3044863 bp Feature: gene Location: 3744518-3748633 bp Feature: domain Description: KOG1320 Location: 3745916-3747425 bp Feature: domain Description: KOG132 0 Location: 3745916-374742 5 bp Feature: domain Description: SidE Location: 3747548-3748133 bp Feature: domain Description: SidE Location: 3747548-3748133 bp Feature: gene Location: 3749059-3750711 bp Feature: domain Description: COG5001 Location: 3749140-3750667 bp Feature: domain Description: COG5001 Location: 3749140-3750667 bp Feature: gene Location: 3751340-3752821 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3751670-3752309 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3751670-3752 309 bp Feature: gene Location: 3752805-3753908 bp Feature: domain Description: CAP_ED Location: 3752835-3753135 bp Feature: domain Description: CAP_ED Location: 3752 835-3753135 bp Feature: domain Description: CPBP Location: 3753615-3753861 bp Feature: domain Description: CPBP Location: 3753615-3753861 bp Feature: gene Location: 3753922-3755997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mcbC-like_oxidoreductase, DDE_Tnp_Tn3 (pfam01526), RVT-GII, GIIM (pfam08388), LomR (COG3637), RtcB (pfam01139), KOG1320 (KOG1320, Serine protease ), SidE (pfam12252), COG5001 (Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain ), RVT-UG26/RVT-DGRs/RVT-CRISPR(RVT-UNC)
CAP_ED (cl00047), CPBP