myRT

myRT report for GCA_900454275.1_58706_H02

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Seq: UGRW01000004.1 (63578 bp)
Overview 1 RT 1: 32381-38855 bp Neighborhood of RT #1 [32381, 38857] HTH_1 PBP2_BenM_CatM_CatR PRK12826 RVT-GII GIIM PRK03545 PRK11790 Feature: gene Location: 32381-33304 bp Feature: domain Description: HTH_1 Location: 32390-32567 bp Feature: domain Description: HTH_1 Location: 32390-32567 bp Feature: domain Description: PBP2_BenM_CatM_CatR Location: 32657-33257 bp Feature: domain Description: PBP2_BenM_CatM_CatR Location: 32657-33257 bp Feature: gene Location: 33306-34139 bp Feature: domain Description: PRK12826 Location: 33396-34116 bp Feature: domain Description: PRK1 2826 Location: 33396-341 1 6 bp Feature: gene Location: 34862-36220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35159-35777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 351 59-35777 bp Feature: domain Description: GIIM Note: maturase Location: 35831-36050 bp Feature: domain Description: GIIM Note: maturase Location: 35831 -36050 bp Feature: gene Location: 36339-37514 bp Feature: domain Description: PRK03545 Location: 36369-37491 bp Feature: domain Description: PRK03545 Location: 36369-37491 bp Feature: gene Location: 37625-38857 bp Feature: domain Description: PRK11790 Location: 37637-38855 bp Feature: domain Description: PRK1 1 790 Location: 37637-38855 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UGRW01000003.1 (687548 bp)
Overview 1 RT 1: 11087-17134 bp 2 RT 2: 48984-54803 bp 3 RT 3: 362504-367953 bp 4 RT 4: 486188-490637 bp 5 RT 5: 607754-615192 bp Neighborhood of RT #1 [11087, 17136] COG2331 aspS RVT-GII GIIM PRK10538 PRK13394 Neighborhood of RT #2 [48984, 54817] RVT-GII GIIM PRK15401 2met_isocit_dHY Neighborhood of RT #3 [362504, 367976] CitT rpsP RVT-GII GIIM rimM trmD Neighborhood of RT #4 [486188, 490639] PRK10676 Bfd RVT-GII GIIM bfr Bacterioferritin Neighborhood of RT #5 [607754, 615209] MltB_2 PG_binding_1 PRK11186 RVT-GII GIIM OmpA_C-like Feature: gene Location: 11087-11395 bp Feature: domain Description: COG2331 Location: 11168-11390 bp Feature: domain Description: COG2 331 Location: 11168-11390 bp Feature: gene Location: 11465-13261 bp Feature: domain Description: aspS Location: 11468-13247 bp Feature: domain Description: aspS Location: 11468-132 47 bp Feature: gene Location: 13981-15339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14278-14896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142 78-14896 bp Feature: domain Description: GIIM Note: maturase Location: 14950-15169 bp Feature: domain Description: GIIM Note: maturase Location: 14950-15169 bp Feature: gene Location: 15423-16178 bp Feature: domain Description: PRK10538 Location: 15435-16173 bp Feature: domain Description: PRK10538 Location: 15435-16173 bp Feature: gene Location: 16339-17136 bp Feature: domain Description: PRK13394 Location: 16360-17134 bp Feature: domain Description: PRK13394 Location: 16360-17134 bp Feature: gene Location: 48984-49148 bp Feature: gene Location: 49176-49310 bp Feature: gene Location: 49908-51266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50205-50823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 502 05-5082 3 bp Feature: domain Description: GIIM Note: maturase Location: 50877-51096 bp Feature: domain Description: GIIM Note: maturase Location: 50877-51096 bp Feature: gene Location: 51427-52098 bp Feature: domain Description: PRK15401 Location: 51466-52093 bp Feature: domain Description: PRK15401 Location: 51466-52 093 bp Feature: gene Location: 52208-54817 bp Feature: domain Description: 2met_isocit_dHY Location: 52220-54803 bp Feature: domain Description: 2 met_isocit_dHY Location: 52 2 2 0-54803 bp Feature: gene Location: 362504-363901 bp Feature: domain Description: CitT Location: 362570-363896 bp Feature: domain Description: CitT Location: 362 570-363896 bp Feature: gene Location: 364046-364300 bp Feature: domain Description: rpsP Location: 364049-364268 bp Feature: domain Description: rpsP Location: 364049-3642 68 bp Feature: gene Location: 365081-366439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365378-365996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365378-365996 bp Feature: domain Description: GIIM Note: maturase Location: 366050-366269 bp Feature: domain Description: GIIM Note: maturase Location: 366050-3662 69 bp Feature: gene Location: 366445-367215 bp Feature: domain Description: rimM Location: 366589-367213 bp Feature: domain Description: rimM Location: 366589-3672 13 bp Feature: gene Location: 367215-367976 bp Feature: domain Description: trmD Location: 367218-367953 bp Feature: domain Description: trmD Location: 3672 18-367953 bp Feature: gene Location: 486188-486985 bp Feature: domain Description: PRK10676 Location: 486266-486980 bp Feature: domain Description: PRK10676 Location: 4862 66-486980 bp Feature: gene Location: 487293-487502 bp Feature: domain Description: Bfd Location: 487296-487467 bp Feature: domain Description: Bfd Location: 4872 96-487467 bp Feature: gene Location: 488223-489581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 488520-489138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48852 0-489138 bp Feature: domain Description: GIIM Note: maturase Location: 489192-489411 bp Feature: domain Description: GIIM Note: maturase Location: 489192 -489411 bp Feature: gene Location: 489674-490153 bp Feature: domain Description: bfr Location: 489677-490142 bp Feature: domain Description: bfr Location: 489677-490142 bp Feature: gene Location: 490166-490639 bp Feature: domain Description: Bacterioferritin Location: 490181-490637 bp Feature: domain Description: Bacterioferritin Location: 490181-490637 bp Feature: gene Location: 607754-608992 bp Feature: domain Description: MltB_2 Location: 607874-608762 bp Feature: domain Description: MltB_2 Location: 607874-608762 bp Feature: domain Description: PG_binding_1 Location: 608819-608984 bp Feature: domain Description: PG_binding_1 Location: 608819-608984 bp Feature: gene Location: 609092-611317 bp Feature: domain Description: PRK11186 Location: 609257-611309 bp Feature: domain Description: PRK11186 Location: 6092 57-611309 bp Feature: gene Location: 612024-613382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 612321-612939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 612 32 1-612 939 bp Feature: domain Description: GIIM Note: maturase Location: 612993-613212 bp Feature: domain Description: GIIM Note: maturase Location: 612 993-6132 12 bp Feature: gene Location: 613476-614144 bp Feature: gene Location: 614592-615209 bp Feature: domain Description: OmpA_C-like Location: 614895-615192 bp Feature: domain Description: OmpA_C-like Location: 614895-615192 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UGRW01000001.1 (1713077 bp)
Overview 1 RT 1: 113177-117783 bp 2 RT 2: 587872-595786 bp 3 RT 3: 741783-746127 bp 4 RT 4: 906218-910613 bp 5 RT 5: 959608-966057 bp 6 RT 6: 1005646-1013405 bp 7 RT 7: 1183391-1187405 bp 8 RT 8: 1484235-1488221 bp 9 RT 9: 1611024-1615476 bp 10 RT 10: 1702430-1708636 bp Neighborhood of RT #1 [113177, 117783] LbR_YadA-like LbR_YadA-like LbR_YadA-like YadA_stalk PRK07533 RVT-GII GIIM Neighborhood of RT #2 [587872, 595839] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C IS5 RVT-GII GIIM RVT-GII GIIM HTH_Tnp_1 Neighborhood of RT #3 [741783, 746135] HTH_ARSR RVT-GII GIIM PhnE PhnE Neighborhood of RT #4 [906218, 910618] fumC_II RVT-GII SmrA Neighborhood of RT #5 [959608, 966080] COG5394 MauG RVT-GII GIIM ALDH_F6_MMSDH LysR Neighborhood of RT #6 [1005646, 1013584] autotrans_barl PRK10808 RVT-GII GIIM PRK14092 pcnB Neighborhood of RT #7 [1183391, 1187425] upstrm_HI1419 RVT-GII GIIM HTH_Tnp_1 Tra5 Neighborhood of RT #8 [1484235, 1488221] DmpA Peptidase_M55 RVT-GII GIIM Neighborhood of RT #9 [1611024, 1615476] PRK05198 pyrG RVT-GII GIIM Neighborhood of RT #10 [1702430, 1708636] Ser_Recombinase RVT-GII GIIM RVT-GII GIIM Feature: gene Location: 113177-114913 bp Feature: domain Description: LbR_YadA-like Location: 113381-113744 bp Feature: domain Description: LbR_YadA-like Location: 113 3 81-113 744 bp Feature: domain Description: LbR_YadA-like Location: 113777-114038 bp Feature: domain Description: LbR_YadA-like Location: 113 777-11403 8 bp Feature: domain Description: LbR_YadA-like Location: 114113-114464 bp Feature: domain Description: LbR_YadA-like Location: 114113 -114464 bp Feature: domain Description: YadA_stalk Location: 114716-114845 bp Feature: domain Description: YadA_stalk Location: 114716-114845 bp Feature: gene Location: 115054-115809 bp Feature: domain Description: PRK07533 Location: 115060-115804 bp Feature: domain Description: PRK0753 3 Location: 115060-115804 bp Feature: gene Location: 116011-117369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116308-116926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1163 08-116926 bp Feature: domain Description: GIIM Note: maturase Location: 116980-117199 bp Feature: domain Description: GIIM Note: maturase Location: 116980-117199 bp Feature: gene Location: 117375-117578 bp Feature: gene Location: 117580-117783 bp Feature: gene Location: 587872-589485 bp Feature: domain Description: LZ_Tnp_IS66 Location: 588061-588286 bp Feature: domain Description: LZ_Tnp_IS66 Location: 588061-588286 bp Feature: domain Description: zf-IS66 Location: 588307-588433 bp Feature: domain Description: zf-IS66 Location: 5883 07-58843 3 bp Feature: domain Description: DDE_Tnp_IS66 Location: 588475-589321 bp Feature: domain Description: DDE_Tnp_IS66 Location: 588475-5893 21 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 589342-589453 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 5893 42-589453 bp Feature: gene Location: 589533-589793 bp Feature: domain Description: IS5 Location: 589572-589767 bp Feature: domain Description: IS5 Location: 589572-589767 bp Feature: gene Location: 590400-591758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 590697-591315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 590697-5913 15 bp Feature: domain Description: GIIM Note: maturase Location: 591369-591588 bp Feature: domain Description: GIIM Note: maturase Location: 5913 69-591588 bp Feature: gene Location: 592214-592444 bp Feature: gene Location: 592416-593129 bp Feature: gene Location: 593890-595248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 594187-594805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 594187-594805 bp Feature: domain Description: GIIM Note: maturase Location: 594859-595078 bp Feature: domain Description: GIIM Note: maturase Location: 594859-595078 bp Feature: gene Location: 595342-595473 bp Feature: gene Location: 595573-595839 bp Feature: domain Description: HTH_Tnp_1 Location: 595579-595786 bp Feature: domain Description: HTH_Tnp_1 Location: 595579-595786 bp Feature: gene Location: 741783-742085 bp Feature: domain Description: HTH_ARSR Location: 741843-742068 bp Feature: domain Description: HTH_ARSR Location: 741843 -742068 bp Feature: gene Location: 742192-742332 bp Feature: gene Location: 743022-744380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 743319-743937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 743 3 19-743 93 7 bp Feature: domain Description: GIIM Note: maturase Location: 743991-744210 bp Feature: domain Description: GIIM Note: maturase Location: 743 991-744210 bp Feature: gene Location: 744490-745314 bp Feature: domain Description: PhnE Location: 744571-745309 bp Feature: domain Description: PhnE Location: 744571-7453 09 bp Feature: gene Location: 745311-746135 bp Feature: domain Description: PhnE Location: 745398-746127 bp Feature: domain Description: PhnE Location: 7453 98-746127 bp Feature: gene Location: 906218-907606 bp Feature: domain Description: fumC_II Location: 906221-907592 bp Feature: domain Description: fumC_II Location: 906221-907592 bp Feature: gene Location: 907784-908071 bp Feature: gene Location: 908617-909597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 908914-909511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 908914-909511 bp Feature: gene Location: 909627-909761 bp Feature: gene Location: 909884-910618 bp Feature: domain Description: SmrA Location: 910022-910613 bp Feature: domain Description: SmrA Location: 910022-910613 bp Feature: gene Location: 959608-960189 bp Feature: domain Description: COG5394 Location: 959617-960130 bp Feature: domain Description: COG53 94 Location: 959617-96013 0 bp Feature: gene Location: 960358-961407 bp Feature: domain Description: MauG Location: 960475-961321 bp Feature: domain Description: MauG Location: 960475-9613 21 bp Feature: gene Location: 962130-963488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 962427-963045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 962427-963 045 bp Feature: domain Description: GIIM Note: maturase Location: 963099-963318 bp Feature: domain Description: GIIM Note: maturase Location: 963 099-963 3 18 bp Feature: gene Location: 963574-965067 bp Feature: domain Description: ALDH_F6_MMSDH Location: 963598-965023 bp Feature: domain Description: ALDH_F6_MMSDH Location: 963 598-965023 bp Feature: gene Location: 965115-966080 bp Feature: domain Description: LysR Location: 965190-966057 bp Feature: domain Description: LysR Location: 965190-966057 bp Feature: gene Location: 1005646-1008801 bp Feature: domain Description: autotrans_barl Location: 1007290-1008727 bp Feature: domain Description: autotrans_barl Location: 1007290-1008727 bp Feature: gene Location: 1008902-1009417 bp Feature: domain Description: PRK10808 Location: 1009010-1009409 bp Feature: domain Description: PRK10808 Location: 1009010-1009409 bp Feature: gene Location: 1010147-1011505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1010444-1011062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1010444-1011062 bp Feature: domain Description: GIIM Note: maturase Location: 1011116-1011335 bp Feature: domain Description: GIIM Note: maturase Location: 1011116-10113 3 5 bp Feature: gene Location: 1011589-1012086 bp Feature: domain Description: PRK14092 Location: 1011598-1012075 bp Feature: domain Description: PRK14092 Location: 1011598-1012075 bp Feature: gene Location: 1012079-1013584 bp Feature: domain Description: pcnB Location: 1012217-1013405 bp Feature: domain Description: pcnB Location: 1012217-1013 405 bp Feature: gene Location: 1183391-1183699 bp Feature: domain Description: upstrm_HI1419 Location: 1183409-1183688 bp Feature: domain Description: upstrm_HI1419 Location: 1183 409-1183 688 bp Feature: gene Location: 1184230-1184370 bp Feature: gene Location: 1184972-1186330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1185269-1185887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1185269-1185887 bp Feature: domain Description: GIIM Note: maturase Location: 1185941-1186160 bp Feature: domain Description: GIIM Note: maturase Location: 1185941-1186160 bp Feature: gene Location: 1186419-1186589 bp Feature: domain Description: HTH_Tnp_1 Location: 1186425-1186536 bp Feature: domain Description: HTH_Tnp_1 Location: 1186425-118653 6 bp Feature: gene Location: 1186583-1187425 bp Feature: domain Description: Tra5 Location: 1186826-1187405 bp Feature: domain Description: Tra5 Location: 1186826-1187405 bp Feature: gene Location: 1484235-1485296 bp Feature: domain Description: DmpA Location: 1484259-1485261 bp Feature: domain Description: DmpA Location: 1484259-1485261 bp Feature: gene Location: 1485301-1486119 bp Feature: domain Description: Peptidase_M55 Location: 1485304-1486087 bp Feature: domain Description: Peptidase_M55 Location: 14853 04-1486087 bp Feature: gene Location: 1486449-1487807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1486746-1487364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1486746-14873 64 bp Feature: domain Description: GIIM Note: maturase Location: 1487418-1487637 bp Feature: domain Description: GIIM Note: maturase Location: 1487418-148763 7 bp Feature: gene Location: 1487813-1488016 bp Feature: gene Location: 1488018-1488221 bp Feature: gene Location: 1611024-1611881 bp Feature: domain Description: PRK05198 Location: 1611042-1611840 bp Feature: domain Description: PRK05198 Location: 1611042-1611840 bp Feature: gene Location: 1611878-1613521 bp Feature: domain Description: pyrG Location: 1611887-1613510 bp Feature: domain Description: pyrG Location: 1611887-1613 510 bp Feature: gene Location: 1613704-1615062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1614001-1614619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1614001-1614619 bp Feature: domain Description: GIIM Note: maturase Location: 1614673-1614892 bp Feature: domain Description: GIIM Note: maturase Location: 1614673 -1614892 bp Feature: gene Location: 1615068-1615271 bp Feature: gene Location: 1615273-1615476 bp Feature: gene Location: 1702430-1702639 bp Feature: domain Description: Ser_Recombinase Location: 1702433-1702631 bp Feature: domain Description: Ser_Recombinase Location: 170243 3 -170263 1 bp Feature: gene Location: 1702660-1702794 bp Feature: gene Location: 1703267-1704625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1703564-1704182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1703 564-1704182 bp Feature: domain Description: GIIM Note: maturase Location: 1704236-1704455 bp Feature: domain Description: GIIM Note: maturase Location: 170423 6-1704455 bp Feature: gene Location: 1704631-1704834 bp Feature: gene Location: 1705358-1706716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1705655-1706273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1705655-1706273 bp Feature: domain Description: GIIM Note: maturase Location: 1706327-1706546 bp Feature: domain Description: GIIM Note: maturase Location: 17063 27-1706546 bp Feature: gene Location: 1706722-1706925 bp Feature: gene Location: 1708208-1708636 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT