myRT

myRT report for GCA_900454325.1_57428_E01

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Seq: UGSE01000002.1 (2412025 bp)
Overview 1 RT 1: 9785-13096 bp 2 RT 2: 130505-134403 bp 3 RT 3: 235451-240762 bp 4 RT 4: 402175-409296 bp 5 RT 5: 476616-482272 bp 6 RT 6: 571104-576871 bp 7 RT 7: 652978-658428 bp 8 RT 8: 741283-750360 bp 9 RT 9: 1255623-1260321 bp 10 RT 10: 1416320-1423265 bp 11 RT 11: 1880031-1885914 bp 12 RT 12: 1925775-1935467 bp 13 RT 13: 1964017-1968695 bp 14 RT 14: 2295627-2301755 bp Neighborhood of RT #1 [9785, 13131] Bacterioferritin bfr RVT-GII GIIM Bfd Neighborhood of RT #2 [130505, 134435] trmD rimM RVT-GII GIIM rpsP Neighborhood of RT #3 [235451, 240779] IS5 TRAP_fused RVT-GII GIIM PRK02101 Neighborhood of RT #4 [402175, 409325] outer_YhbN_LptA LPS_export_lptB RVT-GII GIIM HtpG PRK02991 Neighborhood of RT #5 [476616, 482286] PRK13394 PRK10538 RVT-GII GIIM aspS Neighborhood of RT #6 [571104, 576966] FepD TroA_e RVT-GII GIIM MethyltransfD12 MethyltransfD12 Neighborhood of RT #7 [652978, 658451] PRK11790 PRK03545 RVT-GII GIIM PRK12826 Neighborhood of RT #8 [741283, 750362] NadA PhoX RVT-GII GIIM Hia YadA_stalk Hia Neighborhood of RT #9 [1255623, 1260321] RVT-GII GIIM COG3177 Neighborhood of RT #10 [1416320, 1423276] PIN_3 chaperone_ClpB RVT-GII GIIM CspC TonB Neighborhood of RT #11 [1880031, 1885922] COG5510 AtoE RVT-GII GIIM Cytochrom_C_2 PRK09285 Neighborhood of RT #12 [1925775, 1935484] RutG His_Phos_1 RVT-GII GIIM RVT-GII GIIM carB Neighborhood of RT #13 [1964017, 1968703] pcnB PRK14092 RVT-GII GIIM PRK10808 Neighborhood of RT #14 [2295627, 2301763] OmpA_C-like RVT-GII GIIM PRK11186 Feature: gene Location: 9785-10258 bp Feature: domain Description: Bacterioferritin Location: 9800-10256 bp Feature: domain Description: Bacterioferritin Location: 9800-1 0256 bp Feature: gene Location: 10271-10750 bp Feature: domain Description: bfr Location: 10274-10739 bp Feature: domain Description: bfr Location: 1 0274-1 0739 bp Feature: gene Location: 10843-12201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11140-11758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 40-1 1 758 bp Feature: domain Description: GIIM Note: maturase Location: 11812-12031 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 81 2-1 2031 bp Feature: gene Location: 12207-12410 bp Feature: gene Location: 12922-13131 bp Feature: domain Description: Bfd Location: 12925-13096 bp Feature: domain Description: Bfd Location: 1 2925-1 3096 bp Feature: gene Location: 130505-131266 bp Feature: domain Description: trmD Location: 130508-131243 bp Feature: domain Description: trmD Location: 1 30508-1 31 243 bp Feature: gene Location: 131266-132036 bp Feature: domain Description: rimM Location: 131410-132034 bp Feature: domain Description: rimM Location: 1 31 41 0-1 32034 bp Feature: gene Location: 132042-133400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132339-132957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 32339-1 32957 bp Feature: domain Description: GIIM Note: maturase Location: 133011-133230 bp Feature: domain Description: GIIM Note: maturase Location: 1 3301 1 -1 33230 bp Feature: gene Location: 133406-133609 bp Feature: gene Location: 134181-134435 bp Feature: domain Description: rpsP Location: 134184-134403 bp Feature: domain Description: rpsP Location: 1 341 84-1 34403 bp Feature: gene Location: 235451-236461 bp Feature: domain Description: IS5 Location: 235640-236435 bp Feature: domain Description: IS5 Location: 235640-236435 bp Feature: gene Location: 236477-237706 bp Feature: domain Description: TRAP_fused Location: 236534-237683 bp Feature: domain Description: TRAP_fused Location: 236534-237683 bp Feature: gene Location: 237925-239283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 238222-238840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 238222-238840 bp Feature: domain Description: GIIM Note: maturase Location: 238894-239113 bp Feature: domain Description: GIIM Note: maturase Location: 238894-2391 1 3 bp Feature: gene Location: 239289-239492 bp Feature: gene Location: 239994-240779 bp Feature: domain Description: PRK02101 Location: 239997-240762 bp Feature: domain Description: PRK021 01 Location: 239997-240762 bp Feature: gene Location: 402175-402780 bp Feature: domain Description: outer_YhbN_LptA Location: 402256-402691 bp Feature: domain Description: outer_YhbN_LptA Location: 402256-402691 bp Feature: gene Location: 402789-403583 bp Feature: domain Description: LPS_export_lptB Location: 402852-403581 bp Feature: domain Description: LPS_export_lptB Location: 402852-403581 bp Feature: gene Location: 403671-405029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403968-404586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403968-404586 bp Feature: domain Description: GIIM Note: maturase Location: 404640-404859 bp Feature: domain Description: GIIM Note: maturase Location: 404640-404859 bp Feature: gene Location: 405810-407729 bp Feature: domain Description: HtpG Location: 405852-407721 bp Feature: domain Description: HtpG Location: 405852-407721 bp Feature: gene Location: 408033-409325 bp Feature: domain Description: PRK02991 Location: 408069-409296 bp Feature: domain Description: PRK02991 Location: 408069-409296 bp Feature: gene Location: 476616-477413 bp Feature: domain Description: PRK13394 Location: 476637-477411 bp Feature: domain Description: PRK1 3394 Location: 476637-47741 1 bp Feature: gene Location: 477568-478329 bp Feature: domain Description: PRK10538 Location: 477586-478324 bp Feature: domain Description: PRK1 0538 Location: 477586-478324 bp Feature: gene Location: 478412-479770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 478709-479327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 478709-479327 bp Feature: domain Description: GIIM Note: maturase Location: 479381-479600 bp Feature: domain Description: GIIM Note: maturase Location: 479381 -479600 bp Feature: gene Location: 479776-479979 bp Feature: gene Location: 480490-482286 bp Feature: domain Description: aspS Location: 480493-482272 bp Feature: domain Description: aspS Location: 480493-482272 bp Feature: gene Location: 571104-572108 bp Feature: domain Description: FepD Location: 571128-572097 bp Feature: domain Description: FepD Location: 571 1 28-572097 bp Feature: gene Location: 572118-572708 bp Feature: domain Description: TroA_e Location: 572238-572580 bp Feature: domain Description: TroA_e Location: 572238-572580 bp Feature: gene Location: 572885-574243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 573182-573800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5731 82-573800 bp Feature: domain Description: GIIM Note: maturase Location: 573854-574073 bp Feature: domain Description: GIIM Note: maturase Location: 573854-574073 bp Feature: gene Location: 574249-574452 bp Feature: gene Location: 574987-576966 bp Feature: domain Description: MethyltransfD12 Location: 575014-575887 bp Feature: domain Description: MethyltransfD1 2 Location: 57501 4-575887 bp Feature: domain Description: MethyltransfD12 Location: 576118-576871 bp Feature: domain Description: MethyltransfD1 2 Location: 5761 1 8-576871 bp Feature: gene Location: 652978-654210 bp Feature: domain Description: PRK11790 Location: 652990-654208 bp Feature: domain Description: PRK1 1 790 Location: 652990-654208 bp Feature: gene Location: 654321-655496 bp Feature: domain Description: PRK03545 Location: 654351-655473 bp Feature: domain Description: PRK03545 Location: 654351 -655473 bp Feature: gene Location: 655617-656975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 655914-656532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65591 4-656532 bp Feature: domain Description: GIIM Note: maturase Location: 656586-656805 bp Feature: domain Description: GIIM Note: maturase Location: 656586-656805 bp Feature: gene Location: 656981-657184 bp Feature: gene Location: 657696-658451 bp Feature: domain Description: PRK12826 Location: 657705-658428 bp Feature: domain Description: PRK1 2826 Location: 657705-658428 bp Feature: gene Location: 741283-742452 bp Feature: domain Description: NadA Location: 741406-742372 bp Feature: domain Description: NadA Location: 741 406-742372 bp Feature: gene Location: 742570-744711 bp Feature: domain Description: PhoX Location: 742606-744697 bp Feature: domain Description: PhoX Location: 742606-744697 bp Feature: gene Location: 745431-746789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 745728-746346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 745728-746346 bp Feature: domain Description: GIIM Note: maturase Location: 746400-746619 bp Feature: domain Description: GIIM Note: maturase Location: 746400-74661 9 bp Feature: gene Location: 746795-746935 bp Feature: gene Location: 747039-750362 bp Feature: domain Description: Hia Location: 749082-749220 bp Feature: domain Description: Hia Location: 749082-749220 bp Feature: domain Description: YadA_stalk Location: 749415-749526 bp Feature: domain Description: YadA_stalk Location: 74941 5-749526 bp Feature: domain Description: Hia Location: 750003-750360 bp Feature: domain Description: Hia Location: 750003-750360 bp Feature: gene Location: 1255623-1255796 bp Feature: gene Location: 1256340-1256486 bp Feature: gene Location: 1258224-1259582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1258521-1259139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 258521 -1 2591 39 bp Feature: domain Description: GIIM Note: maturase Location: 1259193-1259412 bp Feature: domain Description: GIIM Note: maturase Location: 1 2591 93-1 25941 2 bp Feature: gene Location: 1259843-1260154 bp Feature: domain Description: COG3177 Location: 1259960-1260146 bp Feature: domain Description: COG31 77 Location: 1 259960-1 2601 46 bp Feature: gene Location: 1260190-1260321 bp Feature: gene Location: 1416320-1416931 bp Feature: domain Description: PIN_3 Location: 1416353-1416683 bp Feature: domain Description: PIN_3 Location: 1 41 6353-1 41 6683 bp Feature: gene Location: 1417134-1419707 bp Feature: domain Description: chaperone_ClpB Location: 1417152-1419690 bp Feature: domain Description: chaperone_ClpB Location: 1 41 71 52-1 41 9690 bp Feature: gene Location: 1420442-1421800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1420739-1421357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 420739-1 421 357 bp Feature: domain Description: GIIM Note: maturase Location: 1421411-1421630 bp Feature: domain Description: GIIM Note: maturase Location: 1 421 41 1 -1 421 630 bp Feature: gene Location: 1422003-1422218 bp Feature: domain Description: CspC Location: 1422015-1422207 bp Feature: domain Description: CspC Location: 1 42201 5-1 422207 bp Feature: gene Location: 1422452-1423276 bp Feature: domain Description: TonB Location: 1422584-1423265 bp Feature: domain Description: TonB Location: 1 422584-1 423265 bp Feature: gene Location: 1880031-1880174 bp Feature: domain Description: COG5510 Location: 1880049-1880172 bp Feature: domain Description: COG551 0 Location: 1 880049-1 8801 72 bp Feature: gene Location: 1880388-1881713 bp Feature: domain Description: AtoE Location: 1880397-1881705 bp Feature: domain Description: AtoE Location: 1 880397-1 881 705 bp Feature: gene Location: 1882414-1883808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1882747-1883365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 882747-1 883365 bp Feature: domain Description: GIIM Note: maturase Location: 1883419-1883638 bp Feature: domain Description: GIIM Note: maturase Location: 1 88341 9-1 883638 bp Feature: gene Location: 1883898-1884368 bp Feature: domain Description: Cytochrom_C_2 Location: 1884006-1884360 bp Feature: domain Description: Cytochrom_C_2 Location: 1 884006-1 884360 bp Feature: gene Location: 1884540-1885922 bp Feature: domain Description: PRK09285 Location: 1884558-1885914 bp Feature: domain Description: PRK09285 Location: 1 884558-1 88591 4 bp Feature: gene Location: 1925775-1927220 bp Feature: domain Description: RutG Location: 1925904-1927197 bp Feature: domain Description: RutG Location: 1 925904-1 9271 97 bp Feature: gene Location: 1927348-1927995 bp Feature: domain Description: His_Phos_1 Location: 1927372-1927972 bp Feature: domain Description: His_Phos_1 Location: 1 927372-1 927972 bp Feature: gene Location: 1928083-1929441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1928380-1928998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 928380-1 928998 bp Feature: domain Description: GIIM Note: maturase Location: 1929052-1929271 bp Feature: domain Description: GIIM Note: maturase Location: 1 929052-1 929271 bp Feature: gene Location: 1929447-1929650 bp Feature: gene Location: 1930182-1931540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1930479-1931097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 930479-1 931 097 bp Feature: domain Description: GIIM Note: maturase Location: 1931151-1931370 bp Feature: domain Description: GIIM Note: maturase Location: 1 931 1 51 -1 931 370 bp Feature: gene Location: 1931546-1931749 bp Feature: gene Location: 1932245-1935484 bp Feature: domain Description: carB Location: 1932248-1935467 bp Feature: domain Description: carB Location: 1 932248-1 935467 bp Feature: gene Location: 1964017-1965525 bp Feature: domain Description: pcnB Location: 1964155-1965343 bp Feature: domain Description: pcnB Location: 1 9641 55-1 965343 bp Feature: gene Location: 1965518-1966012 bp Feature: domain Description: PRK14092 Location: 1965533-1965983 bp Feature: domain Description: PRK1 4092 Location: 1 965533-1 965983 bp Feature: gene Location: 1966100-1967458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1966397-1967015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 966397-1 96701 5 bp Feature: domain Description: GIIM Note: maturase Location: 1967069-1967288 bp Feature: domain Description: GIIM Note: maturase Location: 1 967069-1 967288 bp Feature: gene Location: 1967464-1967667 bp Feature: gene Location: 1968188-1968703 bp Feature: domain Description: PRK10808 Location: 1968296-1968695 bp Feature: domain Description: PRK1 0808 Location: 1 968296-1 968695 bp Feature: gene Location: 2295627-2296244 bp Feature: domain Description: OmpA_C-like Location: 2295930-2296227 bp Feature: domain Description: OmpA_C-like Location: 2295930-2296227 bp Feature: gene Location: 2296692-2297360 bp Feature: gene Location: 2297437-2298831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2297770-2298388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2297770-2298388 bp Feature: domain Description: GIIM Note: maturase Location: 2298442-2298661 bp Feature: domain Description: GIIM Note: maturase Location: 2298442-2298661 bp Feature: gene Location: 2298837-2299040 bp Feature: gene Location: 2299538-2301763 bp Feature: domain Description: PRK11186 Location: 2299703-2301755 bp Feature: domain Description: PRK1 1 1 86 Location: 2299703-2301 755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT