myRT

myRT report for GCA_900454595.1_58798_A01

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Seq: UATK01000007.1 (460615 bp)
Overview 1 RT 1: 34793-41618 bp Neighborhood of RT #1 [34793, 41618] RMtype1_S_EcoKI-TRD2-CR2_like RMtype1_S_EcoKI-TRD2-CR2_like COG0610 RVT-UG2 Feature: gene Location: 34793-36178 bp Ori: SPY30529.1 Gene: hsdS Feature: domain Description: RMtype1_S_EcoKI-TRD2-CR2_like Location: 35165-35408 bp Feature: domain Description: RMtype1 _S_EcoKI-TRD2-CR2_like Location: 351 65-35408 bp Feature: domain Description: RMtype1_S_EcoKI-TRD2-CR2_like Location: 35498-36080 bp Feature: domain Description: RMtype1 _S_EcoKI-TRD2-CR2_like Location: 35498-36080 bp Feature: gene Location: 36175-39423 bp Ori: SPY30530.1 Gene: hsdR Feature: domain Description: COG0610 Location: 36208-39340 bp Feature: domain Description: COG061 0 Location: 36208-39340 bp Feature: gene Location: 39507-40580 bp Ori: SPY30531.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 39510-40332 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 3951 0-40332 bp Feature: gene Location: 40838-41053 bp Feature: gene Location: 41403-41618 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_EcoKI-TRD2-CR2_like (cd17261), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-UG2

Seq: UATK01000006.1 (1229970 bp)
Overview 1 RT 1: 715834-720309 bp Neighborhood of RT #1 [715834, 721073] DNA_RNApol_7kD DNA_RNApol_7kD RVT-UG12 RES pfam00656 Feature: gene Location: 715834-716070 bp Ori: SPY30046.1 Feature: domain Description: DNA_RNApol_7kD Location: 715858-715882 bp Feature: domain Description: DNA_RNApol_7kD Location: 715858-715882 bp Feature: domain Description: DNA_RNApol_7kD Location: 715909-715957 bp Feature: domain Description: DNA_RNApol_7kD Location: 715909-715957 bp Feature: gene Location: 716067-716534 bp Feature: gene Location: 716580-718190 bp Ori: SPY30048.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 716937-717372 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 716937-717372 bp Feature: gene Location: 718311-719075 bp Ori: SPY30049.1 Feature: domain Description: RES Location: 718596-718992 bp Feature: domain Description: RES Location: 718596-718992 bp Feature: gene Location: 719646-721073 bp Ori: SPY30050.1 Feature: domain Description: pfam00656 Location: 719658-720309 bp Feature: domain Description: pfam00656 Location: 719658-72 0309 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DNA_RNApol_7kD (pfam03604), RVT-UG12, RES (smart00953), pfam00656 (Peptidase_C14;Caspase domain)

Seq: UATK01000001.1 (1834075 bp)
Overview 1 RT 1: 1064059-1069601 bp 2 RT 2: 1544492-1551033 bp 3 RT 3: 1559491-1566910 bp Neighborhood of RT #1 [1064059, 1069601] PRK00378 RVT-UG15 Neighborhood of RT #2 [1544492, 1551033] HTH_XRE RVT-UG5 SH3_3 Neighborhood of RT #3 [1559491, 1567191] HTH_29 rve HTH_29 RVT-Retrons DUF4357 SSL2 Feature: gene Location: 1064059-1065381 bp Feature: gene Location: 1065338-1066339 bp Ori: SPY24323.1 Gene: yejK_2 Feature: domain Description: PRK00378 Location: 1065341-1066328 bp Feature: domain Description: PRK003 78 Location: 10653 41-10663 28 bp Feature: gene Location: 1066899-1068524 bp Ori: SPY24324.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 1067295-1067691 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 1067295-1067691 bp Feature: gene Location: 1068538-1068774 bp Feature: gene Location: 1069449-1069601 bp Feature: gene Location: 1544492-1544725 bp Ori: SPY24991.1 Feature: domain Description: HTH_XRE Location: 1544498-1544660 bp Feature: domain Description: HTH_XRE Location: 1544498-1544660 bp Feature: gene Location: 1545039-1545491 bp Feature: gene Location: 1545508-1548720 bp Ori: SPY24993.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1546039-1546537 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 154603 9-154653 7 bp Feature: gene Location: 1549400-1550431 bp Ori: SPY24994.1 Feature: domain Description: SH3_3 Location: 1550252-1550417 bp Feature: domain Description: SH3 _3 Location: 1550252-1550417 bp Feature: gene Location: 1550593-1551033 bp Feature: gene Location: 1559491-1559682 bp Feature: gene Location: 1560055-1561575 bp Ori: SPY25005.1 Feature: domain Description: HTH_29 Location: 1560127-1560253 bp Feature: domain Description: HTH_29 Location: 1560127-1560253 bp Feature: domain Description: rve Location: 1560469-1560811 bp Feature: domain Description: rve Location: 1560469-1560811 bp Feature: domain Description: HTH_29 Location: 1561213-1561393 bp Feature: domain Description: HTH_29 Location: 1561213 -15613 93 bp Feature: gene Location: 1563421-1565232 bp Ori: SPY25006.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1563502-1564219 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1563 502-1564219 bp Feature: gene Location: 1565444-1565812 bp Ori: SPY25007.1 Feature: domain Description: DUF4357 Location: 1565621-1565786 bp Feature: domain Description: DUF43 57 Location: 1565621-1565786 bp Feature: gene Location: 1565809-1567191 bp Ori: SPY25008.1 Feature: domain Description: SSL2 Location: 1565815-1566910 bp Feature: domain Description: SSL2 Location: 1565815-1566910 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00378 (nucleoid-associated protein NdpA; Validated), RVT-UG15, HTH_XRE (smart00530), RVT-UG5, SH3_3 (pfam08239), HTH_29 (pfam13551), rve (pfam00665), RVT-Retrons, DUF4357 (pfam14267), SSL2 (COG1061)