myRT

myRT report for GCA_900454815.1_52278_C01

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Seq: UGTE01000001.1 (1625006 bp)
Overview 1 RT 1: 107079-113866 bp Neighborhood of RT #1 [107079, 114237] PRK13357 HTH_17 COG3177 RVT-AbiP2 WcaG DUF349 DUF349 DUF349 DUF349 DUF349 Feature: gene Location: 107079-108098 bp Feature: domain Description: PRK13357 Location: 107085-108093 bp Feature: domain Description: PRK1 3357 Location: 1 07085-1 08093 bp Feature: gene Location: 108501-109388 bp Feature: domain Description: HTH_17 Location: 108510-108630 bp Feature: domain Description: HTH_1 7 Location: 1 0851 0-1 08630 bp Feature: domain Description: COG3177 Location: 108639-109257 bp Feature: domain Description: COG31 77 Location: 1 08639-1 09257 bp Feature: gene Location: 110034-111029 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 110037-110433 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 1 0037-1 1 0433 bp Feature: gene Location: 111242-112273 bp Feature: domain Description: WcaG Location: 111278-112244 bp Feature: domain Description: WcaG Location: 1 1 1 278-1 1 2244 bp Feature: gene Location: 112381-114237 bp Feature: domain Description: DUF349 Location: 112714-112924 bp Feature: domain Description: DUF349 Location: 1 1 271 4-1 1 2924 bp Feature: domain Description: DUF349 Location: 112939-113155 bp Feature: domain Description: DUF349 Location: 1 1 2939-1 1 31 55 bp Feature: domain Description: DUF349 Location: 113170-113401 bp Feature: domain Description: DUF349 Location: 1 1 31 70-1 1 3401 bp Feature: domain Description: DUF349 Location: 113416-113626 bp Feature: domain Description: DUF349 Location: 1 1 341 6-1 1 3626 bp Feature: domain Description: DUF349 Location: 113647-113866 bp Feature: domain Description: DUF349 Location: 1 1 3647-1 1 3866 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13357 (branched-chain amino acid aminotransferase; Provisional), HTH_17 (pfam12728), COG3177 (Fic family protein ), RVT-AbiP2, WcaG (COG0451), DUF349 (pfam03993)

Seq: UGTE01000002.1 (486733 bp)
Overview 1 RT 1: 174521-181120 bp Neighborhood of RT #1 [174521, 181128] DUF4099 DUF3945 DUF3945 PRK07726 RVT-GII Intron_maturas2 HNHc PRK07726 DUF1896 Feature: gene Location: 174521-175912 bp Feature: domain Description: DUF4099 Location: 174902-175145 bp Feature: domain Description: DUF4099 Location: 174902 -175145 bp Feature: domain Description: DUF3945 Location: 175244-175418 bp Feature: domain Description: DUF3945 Location: 1752 44-175418 bp Feature: domain Description: DUF3945 Location: 175544-175655 bp Feature: domain Description: DUF3945 Location: 175544-175655 bp Feature: gene Location: 175947-176330 bp Feature: domain Description: PRK07726 Location: 175950-176313 bp Feature: domain Description: PRK0772 6 Location: 175950-176313 bp Feature: gene Location: 176875-178677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 177139-177961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 177139-177961 bp Feature: domain Description: Intron_maturas2 Location: 178069-178375 bp Feature: domain Description: Intron_maturas2 Location: 178069-178375 bp Feature: domain Description: HNHc Note: nucleases Location: 178513-178657 bp Feature: domain Description: HNHc Note: nucleases Location: 178513-178657 bp Feature: gene Location: 178643-180559 bp Feature: domain Description: PRK07726 Location: 178793-180359 bp Feature: domain Description: PRK0772 6 Location: 178793-180359 bp Feature: gene Location: 180580-181128 bp Feature: domain Description: DUF1896 Location: 180712-181120 bp Feature: domain Description: DUF1896 Location: 180712 -18112 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4099 (pfam13351), DUF3945 (pfam13101), PRK07726 (DNA topoisomerase 3), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF1896 (pfam08989)