myRT

myRT report for GCA_900454955.1_53421_G01

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Seq: UGTL01000002.1 (602886 bp)
Overview 1 RT 1: 21469-25459 bp 2 RT 2: 596378-600383 bp Neighborhood of RT #1 [21469, 25479] TraO Bac_Flav_CT_N RVT-GII Intron_maturas2 Bac_Flav_CT_N Neighborhood of RT #2 [596378, 600403] TraO DUF4138 RVT-GII Intron_maturas2 Bac_Flav_CT_N Feature: gene Location: 21469-22041 bp Feature: domain Description: TraO Location: 21541-22039 bp Feature: domain Description: TraO Location: 21 541 -22039 bp Feature: gene Location: 22041-22748 bp Feature: domain Description: Bac_Flav_CT_N Location: 22164-22722 bp Feature: domain Description: Bac_Flav_CT_N Location: 221 64-22722 bp Feature: gene Location: 22738-24549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23002-23824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23002-23824 bp Feature: domain Description: Intron_maturas2 Location: 23896-24202 bp Feature: domain Description: Intron_maturas2 Location: 23896-24202 bp Feature: gene Location: 24584-24919 bp Feature: gene Location: 25090-25479 bp Feature: domain Description: Bac_Flav_CT_N Location: 25093-25459 bp Feature: domain Description: Bac_Flav_CT_N Location: 25093-25459 bp Feature: gene Location: 596378-596959 bp Feature: domain Description: TraO Location: 596459-596957 bp Feature: domain Description: TraO Location: 596459-596957 bp Feature: gene Location: 596965-597672 bp Feature: domain Description: DUF4138 Location: 597085-597649 bp Feature: domain Description: DUF41 38 Location: 597085-597649 bp Feature: gene Location: 597662-599473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 597926-598748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 597926-598748 bp Feature: domain Description: Intron_maturas2 Location: 598817-599126 bp Feature: domain Description: Intron_maturas2 Location: 59881 7-5991 26 bp Feature: gene Location: 599508-599843 bp Feature: gene Location: 600014-600403 bp Feature: domain Description: Bac_Flav_CT_N Location: 600017-600383 bp Feature: domain Description: Bac_Flav_CT_N Location: 60001 7-600383 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: UGTL01000001.1 (2402153 bp)
Overview 1 RT 1: 827992-832284 bp 2 RT 2: 1941363-1945368 bp 3 RT 3: 2214149-2220232 bp Neighborhood of RT #1 [827992, 832475] DDE_Tnp_1_3 DDE_Tnp_1_3 RVT-GII GIIM DUF4372 DDE_Tnp_1 Neighborhood of RT #2 [1941363, 1945388] TraO DUF4138 RVT-GII Intron_maturas2 Bac_Flav_CT_N Neighborhood of RT #3 [2214149, 2220232] HTH_17 COG3943 RVT-GII Intron_maturas2 Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 827992-828441 bp Feature: domain Description: DDE_Tnp_1_3 Location: 828322-828439 bp Feature: domain Description: DDE_Tnp_1_3 Location: 82 832 2 -82 8439 bp Feature: gene Location: 828499-828897 bp Feature: domain Description: DDE_Tnp_1_3 Location: 828505-828784 bp Feature: domain Description: DDE_Tnp_1_3 Location: 82 8505-82 8784 bp Feature: gene Location: 829267-830547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 829468-830083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 9468-830083 bp Feature: domain Description: GIIM Note: maturase Location: 830143-830374 bp Feature: domain Description: GIIM Note: maturase Location: 830143-830374 bp Feature: gene Location: 830780-831139 bp Feature: gene Location: 831252-832475 bp Feature: domain Description: DUF4372 Location: 831279-831492 bp Feature: domain Description: DUF4372 Location: 8312 79-831492 bp Feature: domain Description: DDE_Tnp_1 Location: 831642-832284 bp Feature: domain Description: DDE_Tnp_1 Location: 831642 -832 2 84 bp Feature: gene Location: 1941363-1941944 bp Feature: domain Description: TraO Location: 1941444-1941942 bp Feature: domain Description: TraO Location: 1941444-1941942 bp Feature: gene Location: 1941950-1942663 bp Feature: domain Description: DUF4138 Location: 1942079-1942640 bp Feature: domain Description: DUF4138 Location: 1942 079-1942 640 bp Feature: gene Location: 1942647-1944458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1942911-1943733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1942 911-1943733 bp Feature: domain Description: Intron_maturas2 Location: 1943802-1944111 bp Feature: domain Description: Intron_maturas2 Location: 1943802 -1944111 bp Feature: gene Location: 1944493-1944828 bp Feature: gene Location: 1944999-1945388 bp Feature: domain Description: Bac_Flav_CT_N Location: 1945002-1945368 bp Feature: domain Description: Bac_Flav_CT_N Location: 1945002 -1945368 bp Feature: gene Location: 2214149-2214454 bp Feature: domain Description: HTH_17 Location: 2214287-2214416 bp Feature: domain Description: HTH_17 Location: 2 2 142 87-2 2 14416 bp Feature: gene Location: 2214532-2215017 bp Feature: domain Description: COG3943 Location: 2214694-2214943 bp Feature: domain Description: COG3943 Location: 2 2 14694-2 2 14943 bp Feature: gene Location: 2215108-2216916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2215372-2216194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 15372 -2 2 16194 bp Feature: domain Description: Intron_maturas2 Location: 2216305-2216575 bp Feature: domain Description: Intron_maturas2 Location: 2 2 16305-2 2 16575 bp Feature: gene Location: 2217463-2218632 bp Feature: domain Description: Arm-DNA-bind_5 Location: 2217493-2217748 bp Feature: domain Description: Arm-DNA-bind_5 Location: 2 2 17493-2 2 17748 bp Feature: domain Description: Phage_int_SAM_5 Location: 2217787-2218108 bp Feature: domain Description: Phage_int_SAM_5 Location: 2 2 17787-2 2 18108 bp Feature: domain Description: INTN1_C_like Location: 2218147-2218615 bp Feature: domain Description: INTN1_C_like Location: 2 2 18147-2 2 18615 bp Feature: gene Location: 2220104-2220232 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT