myRT

myRT report for GCA_900456035.1_46983_D01

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Seq: UGWA01000002.1 Salmonella enterica strain NCTC5801 genome assembly, contig: ERS1183433SCcontig000002, whole genome shotgun sequence (4763815 bp)
Overview 1 RT 1: 683649-689954 bp 2 RT 2: 4743602-4748864 bp Neighborhood of RT #1 [683649, 689956] 5 RVT-UG11 PRK10201 PRK05658 Neighborhood of RT #2 [4743602, 4748864] PRK10216 PRK10473 RVT-UG7 Feature: gene Location: 683649-685349 bp Ori: SUE96555.1 Feature: domain Description: 5 Location: 684873-685167 bp Feature: domain Description: 5 Location: 684873-6851 67 bp Feature: gene Location: 686101-686286 bp Feature: gene Location: 686256-687020 bp Ori: SUE96557.1 Gene: STY2879 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 686379-686832 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 686379-686832 bp Feature: gene Location: 687344-687850 bp Ori: SUE96558.1 Gene: mug Feature: domain Description: PRK10201 Location: 687347-687845 bp Feature: domain Description: PRK1 0201 Location: 687347-687845 bp Feature: gene Location: 687974-689956 bp Ori: SUE96559.1 Gene: rpoD Feature: domain Description: PRK05658 Location: 688112-689954 bp Feature: domain Description: PRK05658 Location: 6881 1 2-689954 bp Feature: gene Location: 4743602-4744561 bp Ori: SUF00272.1 Gene: yidZ Feature: domain Description: PRK10216 Location: 4743605-4744556 bp Feature: domain Description: PRK1 021 6 Location: 4743605-4744556 bp Feature: gene Location: 4744530-4745717 bp Ori: SUF00273.1 Gene: mdtL_2 Feature: domain Description: PRK10473 Location: 4744533-4745709 bp Feature: domain Description: PRK1 0473 Location: 4744533-4745709 bp Feature: gene Location: 4746248-4747786 bp Ori: SUF00274.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 4746620-4747040 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 4746620-4747040 bp Feature: gene Location: 4747848-4748318 bp Feature: gene Location: 4748730-4748864 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PRK10216 (HTH-type transcriptional regulator YidZ), PRK10473 (MdtL family multidrug efflux MFS transporter), RVT-UG7