myRT

myRT report for GCA_900457065.1_57675_D02

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Seq: UGYP01000001.1 Shewanella putrefaciens strain NCTC10695 genome assembly, contig: ERS1883796SCcontig000001, whole genome shotgun sequence (4451203 bp)
Overview 1 RT 1: 1473843-1479786 bp 2 RT 2: 4144639-4149822 bp Neighborhood of RT #1 [1473843, 1479786] RVT_N RVT-GII GIIM Neighborhood of RT #2 [4144639, 4150463] DDE_Tnp_1 DDE_Tnp_1_5 RVT-Retrons CheY Feature: gene Location: 1473843-1473983 bp Feature: gene Location: 1474234-1474635 bp Feature: gene Location: 1474621-1476093 bp Feature: RT Description: RVT_N Location: 1474669-1474912 bp Feature: RT Description: RVT_N Location: 1 474669-1 47491 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1474957-1475584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 474957-1 475584 bp Feature: domain Description: GIIM Note: maturase Location: 1475644-1475869 bp Feature: domain Description: GIIM Note: maturase Location: 1 475644-1 475869 bp Feature: gene Location: 1476112-1476261 bp Feature: gene Location: 1476523-1479786 bp Feature: gene Location: 4144639-4145142 bp Feature: domain Description: DDE_Tnp_1 Location: 4144642-4145050 bp Feature: domain Description: DDE_Tnp_1 Location: 41 44642-41 45050 bp Feature: gene Location: 4145188-4145460 bp Feature: domain Description: DDE_Tnp_1_5 Location: 4145224-4145452 bp Feature: domain Description: DDE_Tnp_1 _5 Location: 41 45224-41 45452 bp Feature: gene Location: 4145908-4148331 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4146094-4146745 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 41 46094-41 46745 bp Feature: gene Location: 4148332-4148703 bp Feature: gene Location: 4148703-4150463 bp Feature: domain Description: CheY Location: 4149459-4149822 bp Feature: domain Description: CheY Location: 41 49459-41 49822 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609), DDE_Tnp_1_5 (pfam13737), RVT-Retrons, CheY (COG0784)